Strain Fitness in Erwinia amylovora T8 around OLJFJH_17730

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,726,649	+				-0.8
3,726,649	+				-0.2
3,726,649	+				+0.9
3,726,649	+				-0.1
3,726,649	+				+0.7
3,726,650	-				+1.3
3,726,650	-				+2.3
3,726,650	-				-1.7
3,726,650	-				+0.2
3,726,656	+				+1.2
3,726,657	-				-0.1
3,726,658	+				+1.5
3,726,669	-				+0.2
3,726,669	-				-1.2
3,726,669	-				-2.0
3,726,669	-				-1.6
3,726,685	+				-1.5
3,726,741	+				-1.5
3,726,748	-				-4.3
3,726,837	+		OLJFJH_17725	0.20	+0.8
3,726,838	-		OLJFJH_17725	0.20	-2.6
3,726,838	-		OLJFJH_17725	0.20	-0.5
3,726,838	-		OLJFJH_17725	0.20	-1.5
3,726,872	-		OLJFJH_17725	0.24	+0.9
3,727,019	+		OLJFJH_17725	0.41	-0.9
3,727,019	+		OLJFJH_17725	0.41	-0.5
3,727,020	-		OLJFJH_17725	0.41	-0.8
3,727,054	+		OLJFJH_17725	0.45	+0.8
3,727,054	+		OLJFJH_17725	0.45	-1.7
3,727,054	+		OLJFJH_17725	0.45	-0.0
3,727,054	+		OLJFJH_17725	0.45	-3.7
3,727,055	-		OLJFJH_17725	0.45	+0.1
3,727,261	+		OLJFJH_17725	0.69	+1.5
3,727,261	+		OLJFJH_17725	0.69	+0.1
3,727,449	+				-0.2
3,727,537	+				-2.1
3,727,538	-				-1.6
3,727,568	-				+1.4
3,727,568	-				-0.5
3,727,620	+				+0.4
3,727,620	+				-0.6
3,727,620	+				-1.8
3,727,620	+				-1.6
3,727,620	+				-2.9
3,727,620	+				-0.8
3,727,621	-				+0.4
3,727,621	-				-1.8
3,727,621	-				-0.1
3,727,621	-				-0.7
3,727,621	-				-3.2
3,727,621	-				-1.2
3,727,622	+				-0.9
3,727,622	+				-0.3
3,727,622	+				+0.2
3,727,622	+				+1.9
3,727,622	+				+1.2
3,727,622	+				-3.8
3,727,622	+				-1.2
3,727,622	+				+1.7
3,727,622	+				-1.9
3,727,622	+				+0.2
3,727,622	+				-0.1
3,727,623	-				-1.3
3,727,623	-				-2.2
3,727,623	-				+0.3
3,727,623	-				+0.2
3,727,623	-				-0.8
3,727,623	-				+0.7
3,727,639	+				-1.2
3,727,682	+		OLJFJH_17730	0.13	+0.6
3,727,791	+		OLJFJH_17730	0.37	-2.9
3,727,831	+		OLJFJH_17730	0.46	+0.1
3,727,831	+		OLJFJH_17730	0.46	+1.7
3,727,832	-		OLJFJH_17730	0.46	+1.7
3,727,856	-		OLJFJH_17730	0.52	+1.7
3,727,856	-		OLJFJH_17730	0.52	+0.9
3,727,983	+		OLJFJH_17730	0.80	-0.8
3,727,983	+		OLJFJH_17730	0.80	+0.1
3,727,983	+		OLJFJH_17730	0.80	+5.6
3,727,984	-		OLJFJH_17730	0.80	+0.8
3,727,984	-		OLJFJH_17730	0.80	-0.7
3,727,985	+		OLJFJH_17730	0.80	-0.3
3,727,985	+		OLJFJH_17730	0.80	-0.0
3,727,986	-		OLJFJH_17730	0.81	+1.2
3,727,996	-		OLJFJH_17730	0.83	-0.7
3,727,996	-		OLJFJH_17730	0.83	+2.4
3,728,007	+		OLJFJH_17730	0.85	-0.2
3,728,007	+		OLJFJH_17730	0.85	-0.1
3,728,137	-				-0.3
3,728,183	+				+0.7
3,728,193	+				+0.7
3,728,275	-				+0.4
3,728,275	-				+1.4
3,728,311	-				-2.9
3,728,311	-				-2.7
3,728,366	-		OLJFJH_17735	0.10	-4.3
3,728,518	-		OLJFJH_17735	0.19	-1.0
3,728,559	+		OLJFJH_17735	0.22	-2.0
3,728,560	-		OLJFJH_17735	0.22	-0.1
3,728,560	-		OLJFJH_17735	0.22	+1.6
3,728,560	-		OLJFJH_17735	0.22	+1.3
3,728,606	-		OLJFJH_17735	0.24	-0.8
3,728,638	-		OLJFJH_17735	0.26	-2.5
3,728,638	-		OLJFJH_17735	0.26	+1.8
3,728,890	+		OLJFJH_17735	0.41	-2.6
3,728,892	+		OLJFJH_17735	0.41	-2.0
3,728,892	+		OLJFJH_17735	0.41	+0.4
3,728,892	+		OLJFJH_17735	0.41	+0.9
3,728,893	-		OLJFJH_17735	0.41	-0.4
3,728,893	-		OLJFJH_17735	0.41	+0.0
3,728,893	-		OLJFJH_17735	0.41	+0.1
3,728,933	-		OLJFJH_17735	0.43	-0.6
3,728,987	-		OLJFJH_17735	0.47	-0.1
3,729,013	+		OLJFJH_17735	0.48	-0.2
3,729,014	-		OLJFJH_17735	0.48	-0.6
3,729,015	+		OLJFJH_17735	0.48	-0.3
3,729,016	-		OLJFJH_17735	0.48	-2.6
3,729,016	-		OLJFJH_17735	0.48	-1.5
3,729,016	-		OLJFJH_17735	0.48	+0.9
3,729,016	-		OLJFJH_17735	0.48	-0.5
3,729,016	-		OLJFJH_17735	0.48	+0.7