Strain Fitness in Erwinia amylovora T8 around OLJFJH_17435

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,681,931	+				-3.0
3,681,931	+				-0.3
3,681,962	+				-3.2
3,681,972	+				-0.4
3,681,980	+				-0.4
3,682,029	+				-1.1
3,682,047	-				+2.4
3,682,049	+				-1.8
3,682,049	+				-0.6
3,682,049	+				+0.1
3,682,049	+				+0.7
3,682,049	+				+1.0
3,682,049	+				-0.6
3,682,050	-				+0.9
3,682,050	-				+2.1
3,682,050	-				-0.5
3,682,161	+				+2.1
3,682,163	+				+0.7
3,682,176	-				+0.9
3,682,249	+				-0.9
3,682,250	-				+0.3
3,682,342	+				-0.5
3,682,342	+				+0.4
3,682,342	+				+0.7
3,682,393	+				+0.5
3,682,393	+				+1.7
3,682,393	+				+0.6
3,682,393	+				-0.6
3,682,393	+				-1.5
3,682,461	-				+0.6
3,682,507	+				-1.4
3,682,508	-				-2.8
3,682,524	-				-0.3
3,682,665	+				+1.0
3,682,679	+				-0.1
3,682,679	+				-0.2
3,682,680	-				+0.7
3,682,807	-				-0.5
3,682,834	+				-2.6
3,682,836	+				-0.3
3,682,847	+				-2.1
3,682,848	-				-1.0
3,682,873	+		OLJFJH_17435	0.14	-0.2
3,682,873	+		OLJFJH_17435	0.14	-1.1
3,682,874	-		OLJFJH_17435	0.15	+1.6
3,682,875	+		OLJFJH_17435	0.16	+0.4
3,682,876	-		OLJFJH_17435	0.18	+4.6
3,682,882	-		OLJFJH_17435	0.26	-0.5
3,682,884	+		OLJFJH_17435	0.28	-3.2
3,682,958	+				-1.5
3,682,960	+				+1.6
3,682,960	+				-1.3
3,682,961	-				-3.1
3,683,008	+		OLJFJH_17440	0.14	-1.4
3,683,008	+		OLJFJH_17440	0.14	-0.6
3,683,009	-		OLJFJH_17440	0.14	-2.1
3,683,014	+		OLJFJH_17440	0.16	-2.9
3,683,015	-		OLJFJH_17440	0.16	+1.5
3,683,015	-		OLJFJH_17440	0.16	-1.3
3,683,080	-		OLJFJH_17440	0.38	+0.7
3,683,132	-		OLJFJH_17440	0.56	+0.3
3,683,159	+		OLJFJH_17440	0.65	-0.1
3,683,211	+		OLJFJH_17440	0.82	-2.8
3,683,212	-		OLJFJH_17440	0.83	-4.2
3,683,212	-		OLJFJH_17440	0.83	-2.6
3,683,221	+		OLJFJH_17440	0.86	+0.7
3,683,222	-		OLJFJH_17440	0.86	+1.9
3,683,222	-		OLJFJH_17440	0.86	+1.2
3,683,222	-		OLJFJH_17440	0.86	+0.8
3,683,262	+				+0.3
3,683,263	-				+0.3
3,683,343	+				+2.0
3,683,352	+				-0.1
3,683,363	+				+0.8
3,683,466	+				+0.6
3,683,493	+				+0.6
3,683,502	-				-3.1
3,683,552	+		OLJFJH_17445	0.37	-2.3
3,683,741	+				-4.4
3,683,741	+				-0.4
3,683,744	+				+1.6
3,683,745	-				-2.5
3,683,805	+				-2.6
3,683,805	+				+1.2
3,683,806	-				+1.1
3,683,821	+				+0.9
3,683,821	+				+1.4
3,683,822	-				-0.9
3,683,822	-				+0.5
3,683,822	-				+1.7
3,683,854	-				+0.8
3,683,859	-				+2.7
3,683,859	-				-0.3
3,683,864	+				+1.6
3,683,890	+				-2.9
3,683,890	+				-0.3
3,683,890	+				+0.5
3,683,890	+				-0.0
3,683,890	+				-0.6
3,683,890	+				-1.6
3,683,891	-				-0.7
3,683,891	-				-2.3
3,683,891	-				-3.6
3,683,925	+		OLJFJH_17450	0.11	-3.9