Strain Fitness in Erwinia amylovora T8 around OLJFJH_17405

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,675,699	+				-2.4
3,675,721	+				-0.1
3,675,780	+				+1.1
3,675,781	-				-0.7
3,675,797	+				-0.2
3,675,797	+				-3.0
3,675,798	-				-3.8
3,675,804	-				+0.3
3,675,998	+		OLJFJH_17400	0.27	+1.0
3,676,004	+		OLJFJH_17400	0.27	-1.3
3,676,194	-		OLJFJH_17400	0.51	+0.4
3,676,463	+		OLJFJH_17400	0.84	-0.9
3,676,463	+		OLJFJH_17400	0.84	+0.7
3,676,463	+		OLJFJH_17400	0.84	-0.6
3,676,464	-		OLJFJH_17400	0.84	+1.4
3,676,464	-		OLJFJH_17400	0.84	+0.5
3,676,570	-				-1.0
3,676,570	-				+2.8
3,676,594	+				+0.2
3,676,594	+				-3.3
3,676,595	-				-1.3
3,676,595	-				-0.2
3,676,595	-				+0.4
3,676,643	+				-0.0
3,676,644	-				+0.0
3,676,645	+				+8.8
3,676,646	-				+1.2
3,676,646	-				-0.6
3,676,730	+				-1.9
3,676,732	+				-2.0
3,676,732	+				-1.8
3,676,732	+				-1.4
3,676,802	+		OLJFJH_17405	0.14	+0.7
3,676,802	+		OLJFJH_17405	0.14	-1.3
3,676,803	-		OLJFJH_17405	0.14	-2.0
3,676,803	-		OLJFJH_17405	0.14	-0.4
3,676,803	-		OLJFJH_17405	0.14	-0.8
3,676,803	-		OLJFJH_17405	0.14	+1.4
3,676,804	+		OLJFJH_17405	0.14	-0.5
3,676,805	-		OLJFJH_17405	0.14	+1.0
3,676,805	-		OLJFJH_17405	0.14	+2.2
3,676,805	-		OLJFJH_17405	0.14	+1.3
3,676,860	-		OLJFJH_17405	0.20	+0.4
3,676,860	-		OLJFJH_17405	0.20	-3.3
3,676,883	+		OLJFJH_17405	0.22	+0.3
3,677,015	+		OLJFJH_17405	0.36	+0.8
3,677,024	+		OLJFJH_17405	0.37	+0.7
3,677,096	+		OLJFJH_17405	0.44	-3.0
3,677,096	+		OLJFJH_17405	0.44	-0.5
3,677,205	-		OLJFJH_17405	0.55	+3.7
3,677,394	+		OLJFJH_17405	0.74	-2.5
3,677,531	+		OLJFJH_17405	0.88	+1.3
3,677,595	-				-2.5
3,677,633	+				+0.7
3,677,702	+				+0.9
3,677,764	+				-0.3
3,677,765	-				+0.0
3,677,810	+				+1.2
3,677,811	-				-0.5
3,677,818	+		OLJFJH_17410	0.10	+0.2
3,677,818	+		OLJFJH_17410	0.10	+1.6
3,677,818	+		OLJFJH_17410	0.10	+0.9
3,677,818	+		OLJFJH_17410	0.10	-0.4
3,677,819	-		OLJFJH_17410	0.10	+0.9
3,677,819	-		OLJFJH_17410	0.10	+1.0
3,677,819	-		OLJFJH_17410	0.10	+1.2
3,677,819	-		OLJFJH_17410	0.10	+0.8
3,677,820	+		OLJFJH_17410	0.10	-3.5
3,677,820	+		OLJFJH_17410	0.10	-2.6
3,677,820	+		OLJFJH_17410	0.10	-1.3
3,677,820	+		OLJFJH_17410	0.10	+2.2
3,677,820	+		OLJFJH_17410	0.10	+0.0
3,677,821	-		OLJFJH_17410	0.11	+0.9
3,677,821	-		OLJFJH_17410	0.11	+0.5
3,678,218	-		OLJFJH_17410	0.36	+0.4
3,678,282	+		OLJFJH_17410	0.40	+0.6
3,678,307	+		OLJFJH_17410	0.42	-0.4
3,678,307	+		OLJFJH_17410	0.42	+0.4
3,678,307	+		OLJFJH_17410	0.42	-1.0
3,678,308	-		OLJFJH_17410	0.42	-0.4
3,678,308	-		OLJFJH_17410	0.42	+0.8
3,678,308	-		OLJFJH_17410	0.42	+1.9
3,678,338	+		OLJFJH_17410	0.44	-0.9
3,678,338	+		OLJFJH_17410	0.44	-1.6
3,678,339	-		OLJFJH_17410	0.44	+0.6
3,678,339	-		OLJFJH_17410	0.44	-2.0
3,678,354	-		OLJFJH_17410	0.45	+0.5
3,678,438	-		OLJFJH_17410	0.50	-0.6
3,678,438	-		OLJFJH_17410	0.50	+0.8