Strain Fitness in Erwinia amylovora T8 around OLJFJH_17375

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,665,463	+				-2.2
3,665,464	-				-0.8
3,665,465	+				+0.4
3,665,468	-				+0.0
3,665,468	-				+1.1
3,665,468	-				+0.1
3,665,468	-				-1.6
3,665,470	-				+0.4
3,665,470	-				+2.0
3,665,476	+				+0.4
3,665,543	+				+0.5
3,665,543	+				-3.8
3,665,544	-				-2.3
3,665,554	+				+2.1
3,665,554	+				-0.2
3,665,647	-				+1.6
3,665,680	-				-0.9
3,665,683	+				+0.5
3,665,711	+				+1.0
3,665,712	-				+2.8
3,665,812	+				+0.8
3,665,815	+				+0.1
3,665,861	+				-1.9
3,665,864	-				+0.3
3,665,864	-				-0.1
3,666,036	+		OLJFJH_17370	0.37	-0.4
3,666,088	+		OLJFJH_17370	0.48	+0.8
3,666,151	-		OLJFJH_17370	0.61	+0.5
3,666,230	+		OLJFJH_17370	0.78	-1.0
3,666,230	+		OLJFJH_17370	0.78	+1.0
3,666,231	-		OLJFJH_17370	0.78	+2.7
3,666,409	+				-3.8
3,666,409	+				-1.6
3,666,410	-				-0.7
3,666,410	-				+1.2
3,666,410	-				+0.4
3,666,451	+				-0.4
3,666,452	-				-3.2
3,666,463	+				-2.0
3,666,463	+				+0.4
3,666,464	-				-0.6
3,666,485	-				+0.3
3,666,568	+				-1.4
3,666,568	+				+1.0
3,666,569	-				+1.3
3,666,569	-				-2.3
3,666,569	-				-3.4
3,666,737	+		OLJFJH_17375	0.15	+0.2
3,666,738	-		OLJFJH_17375	0.15	-0.1
3,666,738	-		OLJFJH_17375	0.15	+0.7
3,666,738	-		OLJFJH_17375	0.15	+0.2
3,666,738	-		OLJFJH_17375	0.15	-3.5
3,666,738	-		OLJFJH_17375	0.15	+3.1
3,666,738	-		OLJFJH_17375	0.15	-3.5
3,666,739	+		OLJFJH_17375	0.15	-0.7
3,666,740	-		OLJFJH_17375	0.15	+0.2
3,666,740	-		OLJFJH_17375	0.15	+1.1
3,666,740	-		OLJFJH_17375	0.15	-1.8
3,666,740	-		OLJFJH_17375	0.15	+0.6
3,666,989	+		OLJFJH_17375	0.26	+1.0
3,666,990	-		OLJFJH_17375	0.26	-1.2
3,666,990	-		OLJFJH_17375	0.26	-0.4
3,666,990	-		OLJFJH_17375	0.26	-4.0
3,667,094	-		OLJFJH_17375	0.30	+1.2
3,667,112	+		OLJFJH_17375	0.31	+0.1
3,667,112	+		OLJFJH_17375	0.31	-0.6
3,667,113	-		OLJFJH_17375	0.31	+0.3
3,667,149	+		OLJFJH_17375	0.32	-2.7
3,667,150	-		OLJFJH_17375	0.33	+0.4
3,667,286	+		OLJFJH_17375	0.38	-1.5
3,667,288	+		OLJFJH_17375	0.38	-3.7
3,667,388	-		OLJFJH_17375	0.43	-0.9
3,667,479	-		OLJFJH_17375	0.46	-1.4
3,667,507	+		OLJFJH_17375	0.48	+1.9
3,667,531	+		OLJFJH_17375	0.49	+1.0
3,667,531	+		OLJFJH_17375	0.49	-1.0
3,667,532	-		OLJFJH_17375	0.49	+0.0
3,667,532	-		OLJFJH_17375	0.49	-0.2
3,667,690	+		OLJFJH_17375	0.55	-0.8
3,667,690	+		OLJFJH_17375	0.55	-0.5
3,667,691	-		OLJFJH_17375	0.55	+0.3
3,667,691	-		OLJFJH_17375	0.55	+1.6
3,667,695	-		OLJFJH_17375	0.55	-0.7
3,667,759	+		OLJFJH_17375	0.58	-2.5
3,667,768	-		OLJFJH_17375	0.58	-2.1
3,667,768	-		OLJFJH_17375	0.58	-0.1
3,667,784	+		OLJFJH_17375	0.59	+0.7
3,667,827	-		OLJFJH_17375	0.61	+0.4
3,667,859	-		OLJFJH_17375	0.62	-0.6
3,667,862	+		OLJFJH_17375	0.62	-3.6
3,667,862	+		OLJFJH_17375	0.62	-0.4
3,667,862	+		OLJFJH_17375	0.62	-0.8
3,667,862	+		OLJFJH_17375	0.62	+1.9
3,667,863	-		OLJFJH_17375	0.62	-3.5
3,667,889	+		OLJFJH_17375	0.64	-1.8
3,667,954	+		OLJFJH_17375	0.66	-0.1
3,668,315	+		OLJFJH_17375	0.81	-2.1
3,668,316	-		OLJFJH_17375	0.81	+1.2
3,668,357	-		OLJFJH_17375	0.83	-0.4
3,668,394	+		OLJFJH_17375	0.85	+1.9
3,668,427	+		OLJFJH_17375	0.86	+0.9
3,668,441	+		OLJFJH_17375	0.87	-1.2
3,668,563	+				+0.7
3,668,563	+				+0.8
3,668,564	-				-4.1
3,668,638	+				-4.7
3,668,638	+				-1.6
3,668,638	+				+0.0
3,668,638	+				-1.4
3,668,638	+				-1.7
3,668,639	-				-0.4
3,668,682	+				-0.7
3,668,689	+				-2.6
3,668,690	-				+0.7
3,668,690	-				-2.6
3,668,690	-				+0.3
3,668,690	-				+0.1
3,668,691	+				-2.2
3,668,691	+				+0.6
3,668,691	+				-0.1
3,668,691	+				-0.0
3,668,691	+				-0.2
3,668,691	+				+0.1
3,668,691	+				+0.4
3,668,691	+				+0.1
3,668,692	-				-0.7
3,668,692	-				+0.4
3,668,712	+				+2.0
3,668,713	-				+0.2
3,668,747	+				-0.3
3,668,751	-				-1.2
3,668,751	-				-0.4
3,668,756	+				-0.4
3,668,756	+				-0.4
3,668,756	+				-0.6
3,668,756	+				-0.1
3,668,756	+				+5.0
3,668,756	+				-1.7
3,668,757	-				-1.1
3,668,824	-				+0.0
3,668,833	+				+0.4
3,668,834	-				+1.9
3,668,934	-				+0.8
3,668,934	-				+0.3
3,669,117	+				-3.2
3,669,118	-				-0.7
3,669,119	+				-0.2
3,669,119	+				+0.4
3,669,168	+		OLJFJH_17380	0.12	-1.5
3,669,171	-		OLJFJH_17380	0.12	-1.8
3,669,213	-		OLJFJH_17380	0.14	-0.3
3,669,227	+		OLJFJH_17380	0.15	+0.9
3,669,286	+		OLJFJH_17380	0.18	+2.9
3,669,286	+		OLJFJH_17380	0.18	-1.7
3,669,529	+		OLJFJH_17380	0.30	+0.3
3,669,529	+		OLJFJH_17380	0.30	+0.4
3,669,529	+		OLJFJH_17380	0.30	-1.2
3,669,529	+		OLJFJH_17380	0.30	-0.6
3,669,530	-		OLJFJH_17380	0.30	+4.0
3,669,530	-		OLJFJH_17380	0.30	-1.4
3,669,530	-		OLJFJH_17380	0.30	-0.4
3,669,534	+		OLJFJH_17380	0.30	+0.9
3,669,553	+		OLJFJH_17380	0.31	-4.7
3,669,647	+		OLJFJH_17380	0.36	+0.1
3,669,749	+		OLJFJH_17380	0.41	+0.5
3,669,750	-		OLJFJH_17380	0.41	-1.2
3,669,750	-		OLJFJH_17380	0.41	+0.8