Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_17065 and OLJFJH_17070 are separated by 177 nucleotides OLJFJH_17070 and OLJFJH_17075 are separated by 116 nucleotides
OLJFJH_17065: OLJFJH_17065 - tryptophan permease, at 3,604,761 to 3,606,005
_17065
OLJFJH_17070: OLJFJH_17070 - hypothetical protein, at 3,606,183 to 3,606,302
_17070
OLJFJH_17075: OLJFJH_17075 - glutamine--tRNA ligase, at 3,606,419 to 3,608,086
_17075
Position (kb)
3606
3607 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3605.205 kb on - strand, within OLJFJH_17065 at 3605.241 kb on - strand, within OLJFJH_17065 at 3605.290 kb on + strand, within OLJFJH_17065 at 3605.291 kb on - strand, within OLJFJH_17065 at 3605.440 kb on + strand, within OLJFJH_17065 at 3605.441 kb on - strand, within OLJFJH_17065 at 3605.546 kb on + strand, within OLJFJH_17065 at 3605.690 kb on + strand, within OLJFJH_17065 at 3605.690 kb on + strand, within OLJFJH_17065 at 3605.691 kb on - strand, within OLJFJH_17065 at 3605.692 kb on + strand, within OLJFJH_17065 at 3605.692 kb on + strand, within OLJFJH_17065 at 3605.693 kb on - strand, within OLJFJH_17065 at 3605.693 kb on - strand, within OLJFJH_17065 at 3605.698 kb on + strand, within OLJFJH_17065 at 3605.698 kb on + strand, within OLJFJH_17065 at 3605.698 kb on + strand, within OLJFJH_17065 at 3605.698 kb on + strand, within OLJFJH_17065 at 3605.699 kb on - strand, within OLJFJH_17065 at 3605.699 kb on - strand, within OLJFJH_17065 at 3605.699 kb on - strand, within OLJFJH_17065 at 3605.824 kb on + strand, within OLJFJH_17065 at 3605.825 kb on - strand, within OLJFJH_17065 at 3605.825 kb on - strand, within OLJFJH_17065 at 3605.979 kb on + strand at 3605.980 kb on - strand at 3606.032 kb on - strand at 3606.083 kb on + strand at 3606.083 kb on + strand at 3606.083 kb on + strand at 3606.083 kb on + strand at 3606.084 kb on - strand at 3606.084 kb on - strand at 3606.089 kb on - strand at 3606.089 kb on - strand at 3606.089 kb on - strand at 3606.089 kb on - strand at 3606.198 kb on + strand, within OLJFJH_17070 at 3606.198 kb on + strand, within OLJFJH_17070 at 3606.199 kb on - strand, within OLJFJH_17070 at 3606.267 kb on - strand, within OLJFJH_17070 at 3606.302 kb on + strand at 3606.314 kb on - strand at 3606.361 kb on + strand at 3606.400 kb on + strand at 3606.401 kb on - strand at 3606.401 kb on - strand at 3606.409 kb on - strand at 3606.409 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 3,605,205 - OLJFJH_17065 0.36 +3.0 3,605,241 - OLJFJH_17065 0.39 -0.4 3,605,290 + OLJFJH_17065 0.42 +0.1 3,605,291 - OLJFJH_17065 0.43 +1.5 3,605,440 + OLJFJH_17065 0.55 +0.2 3,605,441 - OLJFJH_17065 0.55 +0.2 3,605,546 + OLJFJH_17065 0.63 -2.7 3,605,690 + OLJFJH_17065 0.75 -1.1 3,605,690 + OLJFJH_17065 0.75 -1.2 3,605,691 - OLJFJH_17065 0.75 -1.0 3,605,692 + OLJFJH_17065 0.75 -3.3 3,605,692 + OLJFJH_17065 0.75 -3.4 3,605,693 - OLJFJH_17065 0.75 -0.0 3,605,693 - OLJFJH_17065 0.75 +0.1 3,605,698 + OLJFJH_17065 0.75 +0.1 3,605,698 + OLJFJH_17065 0.75 -0.3 3,605,698 + OLJFJH_17065 0.75 -3.3 3,605,698 + OLJFJH_17065 0.75 -2.1 3,605,699 - OLJFJH_17065 0.75 +0.5 3,605,699 - OLJFJH_17065 0.75 -1.8 3,605,699 - OLJFJH_17065 0.75 +0.2 3,605,824 + OLJFJH_17065 0.85 +0.1 3,605,825 - OLJFJH_17065 0.85 -0.4 3,605,825 - OLJFJH_17065 0.85 +0.6 3,605,979 + -0.7 3,605,980 - +0.7 3,606,032 - -0.6 3,606,083 + -1.0 3,606,083 + +1.4 3,606,083 + +1.6 3,606,083 + -0.6 3,606,084 - -3.3 3,606,084 - -2.5 3,606,089 - -3.2 3,606,089 - +0.4 3,606,089 - +1.7 3,606,089 - +0.1 3,606,198 + OLJFJH_17070 0.12 -4.2 3,606,198 + OLJFJH_17070 0.12 +1.5 3,606,199 - OLJFJH_17070 0.13 +1.7 3,606,267 - OLJFJH_17070 0.70 -1.7 3,606,302 + +0.5 3,606,314 - +0.6 3,606,361 + +0.6 3,606,400 + +0.2 3,606,401 - -0.4 3,606,401 - -1.2 3,606,409 - -0.1 3,606,409 - -0.6
Or see this region's nucleotide sequence