Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_16545 and OLJFJH_16550 are separated by 124 nucleotides OLJFJH_16550 and OLJFJH_16555 are separated by 31 nucleotides
OLJFJH_16545: OLJFJH_16545 - urocanate hydratase, at 3,492,892 to 3,494,577
_16545
OLJFJH_16550: OLJFJH_16550 - amidohydrolase, at 3,494,702 to 3,495,868
_16550
OLJFJH_16555: OLJFJH_16555 - DNA-binding protein YbiB, at 3,495,900 to 3,496,871
_16555
Position (kb)
3494
3495
3496 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3493.727 kb on - strand, within OLJFJH_16545 at 3493.770 kb on + strand, within OLJFJH_16545 at 3494.022 kb on + strand, within OLJFJH_16545 at 3494.026 kb on + strand, within OLJFJH_16545 at 3494.028 kb on + strand, within OLJFJH_16545 at 3494.029 kb on - strand, within OLJFJH_16545 at 3494.468 kb on + strand at 3494.469 kb on - strand at 3494.469 kb on - strand at 3494.557 kb on - strand at 3494.575 kb on + strand at 3494.576 kb on - strand at 3494.616 kb on - strand at 3494.650 kb on - strand at 3494.701 kb on + strand at 3494.708 kb on - strand at 3495.119 kb on - strand, within OLJFJH_16550 at 3495.661 kb on + strand, within OLJFJH_16550 at 3495.723 kb on - strand, within OLJFJH_16550 at 3496.174 kb on + strand, within OLJFJH_16555 at 3496.174 kb on + strand, within OLJFJH_16555 at 3496.175 kb on - strand, within OLJFJH_16555 at 3496.175 kb on - strand, within OLJFJH_16555 at 3496.252 kb on + strand, within OLJFJH_16555 at 3496.253 kb on - strand, within OLJFJH_16555 at 3496.485 kb on + strand, within OLJFJH_16555 at 3496.500 kb on - strand, within OLJFJH_16555 at 3496.502 kb on + strand, within OLJFJH_16555 at 3496.502 kb on + strand, within OLJFJH_16555 at 3496.503 kb on - strand, within OLJFJH_16555 at 3496.595 kb on + strand, within OLJFJH_16555 at 3496.596 kb on - strand, within OLJFJH_16555 at 3496.607 kb on + strand, within OLJFJH_16555 at 3496.609 kb on + strand, within OLJFJH_16555 at 3496.609 kb on + strand, within OLJFJH_16555 at 3496.609 kb on + strand, within OLJFJH_16555 at 3496.609 kb on + strand, within OLJFJH_16555 at 3496.609 kb on + strand, within OLJFJH_16555 at 3496.610 kb on - strand, within OLJFJH_16555 at 3496.610 kb on - strand, within OLJFJH_16555 at 3496.610 kb on - strand, within OLJFJH_16555 at 3496.865 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 3,493,727 - OLJFJH_16545 0.50 +0.0 3,493,770 + OLJFJH_16545 0.52 +0.2 3,494,022 + OLJFJH_16545 0.67 -0.3 3,494,026 + OLJFJH_16545 0.67 -0.8 3,494,028 + OLJFJH_16545 0.67 -2.0 3,494,029 - OLJFJH_16545 0.67 -2.5 3,494,468 + -1.8 3,494,469 - +0.0 3,494,469 - -0.7 3,494,557 - +0.9 3,494,575 + +0.1 3,494,576 - -1.8 3,494,616 - +1.7 3,494,650 - -0.6 3,494,701 + +0.1 3,494,708 - -3.2 3,495,119 - OLJFJH_16550 0.36 +2.2 3,495,661 + OLJFJH_16550 0.82 -3.5 3,495,723 - OLJFJH_16550 0.87 -1.1 3,496,174 + OLJFJH_16555 0.28 -0.8 3,496,174 + OLJFJH_16555 0.28 -1.0 3,496,175 - OLJFJH_16555 0.28 +0.5 3,496,175 - OLJFJH_16555 0.28 -3.4 3,496,252 + OLJFJH_16555 0.36 +0.0 3,496,253 - OLJFJH_16555 0.36 +0.4 3,496,485 + OLJFJH_16555 0.60 -0.3 3,496,500 - OLJFJH_16555 0.62 +0.4 3,496,502 + OLJFJH_16555 0.62 +0.2 3,496,502 + OLJFJH_16555 0.62 -0.3 3,496,503 - OLJFJH_16555 0.62 -3.7 3,496,595 + OLJFJH_16555 0.72 +0.6 3,496,596 - OLJFJH_16555 0.72 -3.1 3,496,607 + OLJFJH_16555 0.73 -2.3 3,496,609 + OLJFJH_16555 0.73 -1.0 3,496,609 + OLJFJH_16555 0.73 +0.4 3,496,609 + OLJFJH_16555 0.73 -0.6 3,496,609 + OLJFJH_16555 0.73 +0.4 3,496,609 + OLJFJH_16555 0.73 -0.7 3,496,610 - OLJFJH_16555 0.73 +0.2 3,496,610 - OLJFJH_16555 0.73 +0.9 3,496,610 - OLJFJH_16555 0.73 +0.4 3,496,865 - -0.2
Or see this region's nucleotide sequence