Strain Fitness in Erwinia amylovora T8 around OLJFJH_16445

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,472,996	+		OLJFJH_16440	0.28	-1.6
3,472,997	-		OLJFJH_16440	0.29	+1.4
3,473,227	+		OLJFJH_16440	0.54	-0.1
3,473,228	-		OLJFJH_16440	0.54	+0.2
3,473,385	+		OLJFJH_16440	0.72	+0.6
3,473,448	+		OLJFJH_16440	0.79	-0.2
3,473,531	+		OLJFJH_16440	0.88	+1.2
3,473,577	+				-0.3
3,473,604	+				+0.4
3,473,665	+				-1.2
3,473,666	-				+0.3
3,473,695	+				+0.7
3,473,705	+				-0.2
3,473,705	+				-0.2
3,473,706	-				+0.3
3,473,730	+				+0.4
3,473,755	+				-0.2
3,473,773	+				+1.6
3,473,826	+				-1.1
3,473,875	+				-3.2
3,473,895	+				-0.0
3,473,896	-				-3.6
3,473,943	+				-0.6
3,473,993	+				+2.3
3,473,994	-				-0.1
3,474,044	+				-1.8
3,474,339	+		OLJFJH_16445	0.68	-2.5
3,474,340	-		OLJFJH_16445	0.68	+1.2
3,474,340	-		OLJFJH_16445	0.68	+2.7
3,474,436	+		OLJFJH_16445	0.87	-1.7
3,474,436	+		OLJFJH_16445	0.87	-1.7
3,474,500	+				+0.6
3,474,504	-				+1.1
3,474,580	-				+0.8
3,474,580	-				+1.9
3,474,759	+		OLJFJH_16450	0.68	-1.5
3,474,759	+		OLJFJH_16450	0.68	-1.1
3,474,759	+		OLJFJH_16450	0.68	-0.6
3,474,760	-		OLJFJH_16450	0.68	-1.1
3,474,847	+				-3.2
3,474,847	+				-3.5
3,474,847	+				+0.3
3,474,924	-				+0.7
3,474,927	+				+0.6
3,474,927	+				+0.1
3,474,927	+				-0.3
3,474,953	-				-1.3
3,475,039	+				-2.0
3,475,127	+				+0.1
3,475,127	+				-0.7
3,475,128	-				-3.2
3,475,269	+		OLJFJH_16455	0.18	+0.9
3,475,269	+		OLJFJH_16455	0.18	+1.4
3,475,270	-		OLJFJH_16455	0.18	-3.6
3,475,270	-		OLJFJH_16455	0.18	+1.6
3,475,406	+		OLJFJH_16455	0.36	-1.3