Strain Fitness in Erwinia amylovora T8 around OLJFJH_16005

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,369,106	+				+0.4
3,369,107	-				-1.0
3,369,107	-				+0.4
3,369,107	-				+1.4
3,369,108	+				+2.7
3,369,108	+				+0.7
3,369,109	-				-1.2
3,369,109	-				+0.0
3,369,129	+				-1.5
3,369,130	-				-1.9
3,369,311	-		OLJFJH_16000	0.19	-1.1
3,369,435	-		OLJFJH_16000	0.32	-1.4
3,369,526	+		OLJFJH_16000	0.42	+0.6
3,369,526	+		OLJFJH_16000	0.42	+1.7
3,369,527	-		OLJFJH_16000	0.42	+0.9
3,369,559	+		OLJFJH_16000	0.45	+0.5
3,369,570	+		OLJFJH_16000	0.46	+0.7
3,369,570	+		OLJFJH_16000	0.46	-1.8
3,369,571	-		OLJFJH_16000	0.46	-1.3
3,369,693	-		OLJFJH_16000	0.59	-0.2
3,369,693	-		OLJFJH_16000	0.59	-2.1
3,369,750	+		OLJFJH_16000	0.65	+1.1
3,369,770	+		OLJFJH_16000	0.67	+0.6
3,369,771	-		OLJFJH_16000	0.67	+0.2
3,369,771	-		OLJFJH_16000	0.67	+0.8
3,369,790	+		OLJFJH_16000	0.69	+0.4
3,369,830	-		OLJFJH_16000	0.73	-0.1
3,370,013	+				-0.1
3,370,013	+				-0.7
3,370,026	+				-0.1
3,370,027	-				-3.1
3,370,046	-				-1.2
3,370,189	+		OLJFJH_16005	0.14	+0.3
3,370,547	-		OLJFJH_16005	0.71	-0.5
3,370,558	+		OLJFJH_16005	0.73	+1.4
3,370,558	+		OLJFJH_16005	0.73	+1.4
3,370,559	-		OLJFJH_16005	0.73	-0.4
3,370,678	+				-0.6
3,370,678	+				+0.4
3,370,678	+				-0.5
3,370,679	-				-1.2
3,370,679	-				+0.3
3,370,990	-		OLJFJH_16010	0.52	-0.4
3,371,044	+		OLJFJH_16010	0.62	+1.9
3,371,045	-		OLJFJH_16010	0.63	+0.4
3,371,054	+		OLJFJH_16010	0.64	-3.2
3,371,055	-		OLJFJH_16010	0.64	-0.6
3,371,291	-				-0.1
3,371,428	+		OLJFJH_16015	0.22	-0.1
3,371,673	+		OLJFJH_16015	0.53	-0.6
3,371,673	+		OLJFJH_16015	0.53	-1.1
3,371,673	+		OLJFJH_16015	0.53	+1.1
3,371,673	+		OLJFJH_16015	0.53	-3.4
3,371,673	+		OLJFJH_16015	0.53	+1.8
3,371,673	+		OLJFJH_16015	0.53	-0.9
3,371,703	-		OLJFJH_16015	0.56	+0.5