Strain Fitness in Erwinia amylovora T8 around OLJFJH_15865

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
3,340,530	+				-4.1
3,340,544	+				-0.8
3,340,544	+				+1.5
3,340,545	-				+1.9
3,340,620	+				-0.6
3,340,716	+				-2.1
3,340,717	-				-0.5
3,340,909	+				-0.5
3,341,057	-				-2.2
3,341,202	-				-0.8
3,341,202	-				-2.4
3,341,204	-				+1.1
3,341,224	+				+0.7
3,341,225	-				+0.0
3,341,225	-				+1.8
3,341,254	-		OLJFJH_15865	0.22	+0.7
3,341,415	-				+2.7
3,341,452	+				-0.5
3,341,453	-				-2.7
3,341,456	-				+0.4
3,341,480	+				-1.0
3,341,480	+				+1.2
3,341,481	-		OLJFJH_15870	0.10	-0.1
3,341,485	-		OLJFJH_15870	0.11	-1.8
3,341,533	+		OLJFJH_15870	0.18	+0.7
3,341,534	-		OLJFJH_15870	0.18	+0.9
3,341,534	-		OLJFJH_15870	0.18	-0.7
3,341,611	-		OLJFJH_15870	0.30	+2.2
3,341,611	-		OLJFJH_15870	0.30	-0.9
3,341,748	-		OLJFJH_15870	0.51	-2.3
3,341,779	-		OLJFJH_15870	0.55	-0.1
3,341,801	+		OLJFJH_15870	0.59	+0.8
3,341,801	+		OLJFJH_15870	0.59	+1.0
3,341,982	+		OLJFJH_15870	0.86	-1.1
3,341,982	+		OLJFJH_15870	0.86	-0.0
3,341,982	+		OLJFJH_15870	0.86	-3.8
3,341,982	+		OLJFJH_15870	0.86	+0.4
3,341,982	+		OLJFJH_15870	0.86	-0.1
3,341,982	+		OLJFJH_15870	0.86	+0.9
3,341,983	-		OLJFJH_15870	0.86	+0.6
3,341,983	-		OLJFJH_15870	0.86	-0.6
3,341,983	-		OLJFJH_15870	0.86	-4.5
3,341,984	+		OLJFJH_15870	0.87	+2.3
3,341,984	+		OLJFJH_15870	0.87	+0.2
3,342,006	+				-0.3
3,342,006	+				+0.1
3,342,006	+				-0.3
3,342,006	+				-0.5
3,342,007	-				+0.6
3,342,007	-				-0.1
3,342,010	+				-3.0
3,342,010	+				+0.4
3,342,010	+				-2.1
3,342,019	-				+1.1
3,342,019	-				+1.9
3,342,069	+				-0.9
3,342,069	+				+1.4
3,342,070	-				+0.6
3,342,070	-				+1.7