Strain Fitness in Erwinia amylovora T8 around OLJFJH_14990
Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 |
|---|---|---|---|---|---|
| remove | |||||
| 3,168,097 | + | OLJFJH_14985 | 0.54 | -4.3 | |
| 3,168,098 | - | OLJFJH_14985 | 0.54 | +0.3 | |
| 3,168,154 | + | OLJFJH_14985 | 0.57 | -1.0 | |
| 3,168,495 | + | OLJFJH_14985 | 0.75 | -2.0 | |
| 3,168,496 | - | OLJFJH_14985 | 0.75 | -0.0 | |
| 3,168,623 | - | OLJFJH_14985 | 0.82 | -1.5 | |
| 3,168,691 | - | OLJFJH_14985 | 0.85 | +2.0 | |
| 3,169,066 | - | OLJFJH_14990 | 0.18 | -0.1 | |
| 3,169,094 | - | OLJFJH_14990 | 0.23 | +0.9 | |
| 3,169,193 | + | OLJFJH_14990 | 0.41 | +2.9 | |
| 3,169,205 | + | OLJFJH_14990 | 0.43 | +0.1 | |
| 3,169,571 | + | +1.6 |
Or see this region's nucleotide sequence