Strain Fitness in Erwinia amylovora T8 around OLJFJH_13530

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,849,635	+		OLJFJH_13525	0.89	+0.3
2,849,636	-		OLJFJH_13525	0.89	+0.7
2,849,845	+				-0.3
2,849,893	+				+0.1
2,849,927	-				+2.0
2,850,011	+				+0.4
2,850,013	+				+0.5
2,850,013	+				+0.3
2,850,013	+				+2.1
2,850,014	-				+1.6
2,850,014	-				+0.3
2,850,014	-				+0.8
2,850,014	-				-1.9
2,850,014	-				-0.1
2,850,017	+				+0.3
2,850,026	+				-2.5
2,850,027	-				-1.2
2,850,036	-				+1.1
2,850,045	-				-0.2
2,850,048	+				-0.0
2,850,063	+				+1.7
2,850,162	-				+1.0
2,850,218	+		OLJFJH_13530	0.12	+1.0
2,850,379	+		OLJFJH_13530	0.28	+1.3
2,850,423	+		OLJFJH_13530	0.32	+1.7
2,850,425	+		OLJFJH_13530	0.33	-0.5
2,850,425	+		OLJFJH_13530	0.33	+0.7
2,850,426	-		OLJFJH_13530	0.33	-0.4
2,850,514	+		OLJFJH_13530	0.41	+0.7
2,850,514	+		OLJFJH_13530	0.41	+1.7
2,850,629	+		OLJFJH_13530	0.52	+2.3
2,850,728	+		OLJFJH_13530	0.62	+1.3
2,850,729	-		OLJFJH_13530	0.62	+1.3
2,850,837	-		OLJFJH_13530	0.73	+3.2
2,850,935	-		OLJFJH_13530	0.82	+2.3
2,850,986	+		OLJFJH_13530	0.87	+0.5
2,850,986	+		OLJFJH_13530	0.87	-0.0
2,850,992	+		OLJFJH_13530	0.88	+1.7
2,851,096	+				-1.5
2,851,097	-				-0.7
2,851,251	-				+1.9
2,851,377	+				+0.7
2,851,378	-				+0.3
2,851,505	+				+0.7
2,851,685	+		OLJFJH_13535	0.40	-1.4
2,851,686	-		OLJFJH_13535	0.40	+1.3
2,851,703	+		OLJFJH_13535	0.47	+0.5
2,851,738	-		OLJFJH_13535	0.61	-1.2
2,851,751	+		OLJFJH_13535	0.66	+0.7
2,851,752	-		OLJFJH_13535	0.67	+0.5
2,851,752	-		OLJFJH_13535	0.67	+0.4
2,851,752	-		OLJFJH_13535	0.67	+0.1
2,851,752	-		OLJFJH_13535	0.67	-3.3
2,851,752	-		OLJFJH_13535	0.67	-1.6
2,851,752	-		OLJFJH_13535	0.67	-3.4
2,851,752	-		OLJFJH_13535	0.67	-0.4
2,851,861	+				-4.1
2,851,930	-				-0.4
2,852,097	+		OLJFJH_13540	0.50	+0.6
2,852,097	+		OLJFJH_13540	0.50	+0.3