Strain Fitness in Erwinia amylovora T8 around OLJFJH_13250

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,788,699	+		OLJFJH_13245	0.61	-2.6
2,788,702	+		OLJFJH_13245	0.61	-0.7
2,788,702	+		OLJFJH_13245	0.61	-2.0
2,788,702	+		OLJFJH_13245	0.61	-2.1
2,788,703	-		OLJFJH_13245	0.61	+1.3
2,788,707	+		OLJFJH_13245	0.61	-1.9
2,788,801	-		OLJFJH_13245	0.66	+1.3
2,788,801	-		OLJFJH_13245	0.66	-1.6
2,788,801	-		OLJFJH_13245	0.66	+0.2
2,788,855	+		OLJFJH_13245	0.69	-1.2
2,788,941	+		OLJFJH_13245	0.74	-0.8
2,788,942	-		OLJFJH_13245	0.74	+0.0
2,788,942	-		OLJFJH_13245	0.74	-0.5
2,788,942	-		OLJFJH_13245	0.74	+0.4
2,788,944	+		OLJFJH_13245	0.74	-0.2
2,788,944	+		OLJFJH_13245	0.74	-0.1
2,788,959	+		OLJFJH_13245	0.75	-1.2
2,789,023	+		OLJFJH_13245	0.78	+1.4
2,789,024	-		OLJFJH_13245	0.78	+0.2
2,789,025	+		OLJFJH_13245	0.79	-0.3
2,789,086	+		OLJFJH_13245	0.82	-1.8
2,789,168	+		OLJFJH_13245	0.86	+1.9
2,789,169	-		OLJFJH_13245	0.86	+1.4
2,789,215	+		OLJFJH_13245	0.89	-2.2
2,789,284	+				-2.7
2,789,285	-				-0.8
2,789,285	-				+2.3
2,789,285	-				+0.1
2,789,289	-				-0.0
2,789,387	-				+0.8
2,789,387	-				-0.2
2,789,392	+				+1.1
2,789,392	+				-1.4
2,789,393	-				+1.0
2,789,393	-				-0.0
2,789,422	+				+0.1
2,789,423	-				-0.2
2,789,467	+				-0.1
2,789,511	+				-2.7
2,789,515	+				+0.4
2,789,516	-				-1.7
2,789,577	+				-0.6
2,789,578	-				-1.3
2,789,699	-		OLJFJH_13250	0.15	-3.6
2,789,755	+		OLJFJH_13250	0.25	+2.1
2,789,890	-		OLJFJH_13250	0.50	-0.7
2,789,915	-		OLJFJH_13250	0.54	+1.7
2,790,155	-				-1.5
2,790,159	-				+0.9
2,790,159	-				+0.3
2,790,159	-				-1.3
2,790,165	-				+1.1
2,790,414	-				-0.2
2,790,414	-				-1.2
2,790,414	-				+0.1
2,790,488	+				+0.0
2,790,489	-				+1.3
2,790,489	-				+0.0
2,790,489	-				-0.5
2,790,853	+		OLJFJH_13255	0.27	-0.7
2,790,867	-		OLJFJH_13255	0.28	+1.3
2,791,163	+		OLJFJH_13255	0.43	-1.4
2,791,163	+		OLJFJH_13255	0.43	+0.6
2,791,164	-		OLJFJH_13255	0.43	+2.2
2,791,164	-		OLJFJH_13255	0.43	-1.7
2,791,164	-		OLJFJH_13255	0.43	+0.6
2,791,166	-		OLJFJH_13255	0.43	-0.1