Strain Fitness in Erwinia amylovora T8 around OLJFJH_12955

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,726,976	+				+1.3
2,727,085	-				+0.9
2,727,089	+				+0.0
2,727,121	+				-0.2
2,727,304	-		OLJFJH_12940	0.38	-1.2
2,727,304	-		OLJFJH_12940	0.38	-1.6
2,727,324	+		OLJFJH_12940	0.44	+0.2
2,727,325	-		OLJFJH_12940	0.44	-0.2
2,727,325	-		OLJFJH_12940	0.44	-2.1
2,727,547	-				-3.2
2,727,574	+				-0.9
2,727,574	+				+1.8
2,727,574	+				-3.4
2,727,574	+				+0.1
2,727,574	+				-2.7
2,727,574	+				-2.7
2,727,575	-				-0.7
2,727,575	-				+0.5
2,727,575	-				-0.6
2,727,575	-				+2.0
2,727,575	-				+0.5
2,727,651	+				-0.3
2,727,860	+				-0.2
2,727,923	-				-1.4
2,727,923	-				+0.0
2,727,923	-				-4.0
2,727,923	-				+1.6
2,727,923	-				+3.5
2,727,924	+				-0.2
2,727,930	-				+0.2
2,727,955	+				+0.3
2,727,958	+				+1.8
2,728,027	-				-0.8
2,728,053	-				-1.9
2,728,126	-		OLJFJH_12955	0.14	+0.3
2,728,175	+		OLJFJH_12955	0.19	-0.3
2,728,178	+		OLJFJH_12955	0.19	+4.1
2,728,178	+		OLJFJH_12955	0.19	+3.0
2,728,179	-		OLJFJH_12955	0.20	-1.1
2,728,183	-		OLJFJH_12955	0.20	+0.5
2,728,314	-		OLJFJH_12955	0.32	+1.4
2,728,314	-		OLJFJH_12955	0.32	+0.4
2,728,515	+		OLJFJH_12955	0.52	+0.6
2,728,515	+		OLJFJH_12955	0.52	-1.9
2,728,516	-		OLJFJH_12955	0.52	-1.3
2,728,534	+		OLJFJH_12955	0.54	-0.1
2,728,534	+		OLJFJH_12955	0.54	-0.3
2,728,626	+		OLJFJH_12955	0.62	+8.9
2,728,626	+		OLJFJH_12955	0.62	-2.0
2,728,776	+		OLJFJH_12955	0.77	+1.0
2,729,039	+				+1.5
2,729,039	+				-1.1
2,729,150	+				+0.8
2,729,151	-				+0.2
2,729,192	+				-0.8
2,729,323	+				+0.3
2,729,324	-				-0.4
2,729,332	+				-0.7
2,729,605	+		OLJFJH_12960	0.10	-0.1
2,729,605	+		OLJFJH_12960	0.10	+2.0
2,729,605	+		OLJFJH_12960	0.10	+0.1
2,729,635	+		OLJFJH_12960	0.14	-2.7
2,729,635	+		OLJFJH_12960	0.14	+0.2
2,729,673	-		OLJFJH_12960	0.19	+0.6
2,729,731	+		OLJFJH_12960	0.27	-2.1
2,729,910	-		OLJFJH_12960	0.51	+0.7
2,729,928	+		OLJFJH_12960	0.54	-0.7
2,729,965	+		OLJFJH_12960	0.59	+4.3