Strain Fitness in Erwinia amylovora T8 around OLJFJH_12545

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,638,697	+		OLJFJH_12540	0.56	-1.5
2,638,697	+		OLJFJH_12540	0.56	-1.3
2,638,701	+		OLJFJH_12540	0.56	+0.2
2,638,701	+		OLJFJH_12540	0.56	+0.8
2,638,701	+		OLJFJH_12540	0.56	-0.3
2,638,702	-		OLJFJH_12540	0.56	-2.3
2,638,702	-		OLJFJH_12540	0.56	+0.2
2,638,927	-		OLJFJH_12540	0.72	-2.5
2,638,966	-		OLJFJH_12540	0.75	+1.2
2,638,966	-		OLJFJH_12540	0.75	-0.1
2,638,968	+		OLJFJH_12540	0.75	+1.0
2,638,968	+		OLJFJH_12540	0.75	+0.7
2,638,968	+		OLJFJH_12540	0.75	+0.3
2,638,968	+		OLJFJH_12540	0.75	+2.8
2,638,969	-		OLJFJH_12540	0.75	-2.4
2,639,030	+		OLJFJH_12540	0.80	+1.9
2,639,030	+		OLJFJH_12540	0.80	-0.3
2,639,030	+		OLJFJH_12540	0.80	-0.7
2,639,106	-		OLJFJH_12540	0.85	+0.4
2,639,106	-		OLJFJH_12540	0.85	-0.8
2,639,293	+				+0.0
2,639,299	-				+0.4
2,639,304	+				+3.0
2,639,305	-				-0.2
2,639,382	+				+1.2
2,639,423	+				+0.4
2,639,424	-				+0.6
2,639,433	+				+0.6
2,639,482	-				-1.3
2,639,487	+				+0.1
2,639,583	+				+2.0
2,639,587	+				+1.5
2,639,674	+				-0.5
2,639,675	-				+1.8
2,639,675	-				+1.0
2,639,803	+		OLJFJH_12545	0.25	+0.3
2,639,803	+		OLJFJH_12545	0.25	-0.4
2,639,804	-		OLJFJH_12545	0.25	-2.0
2,640,104	-		OLJFJH_12545	0.61	-0.8
2,640,122	-		OLJFJH_12545	0.63	-1.9
2,640,344	-		OLJFJH_12545	0.89	+0.4
2,640,344	-		OLJFJH_12545	0.89	+0.9
2,640,344	-		OLJFJH_12545	0.89	-0.7
2,640,370	+				+1.6
2,640,517	+				-0.4
2,640,518	-				+0.4
2,640,737	+		OLJFJH_12550	0.24	+1.2
2,640,737	+		OLJFJH_12550	0.24	-0.2
2,640,737	+		OLJFJH_12550	0.24	+0.6
2,640,738	-		OLJFJH_12550	0.24	-1.6
2,640,738	-		OLJFJH_12550	0.24	-0.7
2,640,738	-		OLJFJH_12550	0.24	-1.0
2,640,738	-		OLJFJH_12550	0.24	-4.4
2,640,754	+		OLJFJH_12550	0.26	-1.7
2,640,755	-		OLJFJH_12550	0.26	-3.3
2,640,781	+		OLJFJH_12550	0.28	+0.2
2,640,848	+		OLJFJH_12550	0.35	+1.2
2,640,944	-		OLJFJH_12550	0.45	-1.1
2,640,956	-		OLJFJH_12550	0.47	-1.0
2,640,956	-		OLJFJH_12550	0.47	-1.7
2,640,985	+		OLJFJH_12550	0.50	+0.4