Strain Fitness in Erwinia amylovora T8 around OLJFJH_11380
Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 |
---|---|---|---|---|---|
remove | |||||
2,368,167 | + | OLJFJH_11375 | 0.25 | -2.4 | |
2,368,237 | - | OLJFJH_11375 | 0.35 | -2.3 | |
2,368,268 | + | OLJFJH_11375 | 0.40 | -1.4 | |
2,368,295 | + | OLJFJH_11375 | 0.44 | -0.1 | |
2,368,296 | - | OLJFJH_11375 | 0.44 | -1.0 | |
2,368,296 | - | OLJFJH_11375 | 0.44 | -0.5 | |
2,368,478 | + | OLJFJH_11375 | 0.72 | -0.4 | |
2,368,644 | + | +2.4 | |||
2,368,645 | - | -0.1 | |||
2,368,648 | + | -2.3 | |||
2,368,788 | + | -1.7 | |||
2,368,864 | - | +0.8 | |||
2,368,879 | + | -1.5 | |||
2,368,884 | - | +0.1 | |||
2,368,886 | - | +0.0 | |||
2,369,412 | + | OLJFJH_11380 | 0.37 | +1.4 | |
2,369,595 | - | OLJFJH_11380 | 0.63 | +2.9 | |
2,369,596 | + | OLJFJH_11380 | 0.64 | -2.2 | |
2,369,799 | + | -2.4 | |||
2,369,805 | - | -3.4 | |||
2,369,868 | - | +1.4 | |||
2,370,388 | - | -0.9 | |||
2,370,506 | + | +0.1 |
Or see this region's nucleotide sequence