Strain Fitness in Erwinia amylovora T8 around OLJFJH_10550

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,179,432	+		OLJFJH_10545	0.73	-0.4
2,179,432	+		OLJFJH_10545	0.73	+0.5
2,179,433	-		OLJFJH_10545	0.73	-3.2
2,179,433	-		OLJFJH_10545	0.73	+0.7
2,179,436	+		OLJFJH_10545	0.73	-1.2
2,179,572	+		OLJFJH_10545	0.82	+2.0
2,179,572	+		OLJFJH_10545	0.82	-0.7
2,179,573	-		OLJFJH_10545	0.82	-2.1
2,179,758	+				-1.1
2,179,853	-				+3.3
2,179,866	-				+0.1
2,180,017	+				+0.6
2,180,017	+				-0.5
2,180,017	+				+0.4
2,180,018	-				+0.3
2,180,018	-				-0.8
2,180,018	-				-0.1
2,180,018	-				+0.0
2,180,018	-				-0.3
2,180,036	-				+2.3
2,180,039	-				+0.6
2,180,300	+				-0.3
2,180,367	+				+0.1
2,180,375	+				-2.1
2,180,411	-				+1.5
2,180,453	-				-0.2
2,180,546	+				-1.3
2,180,552	+				-2.5
2,180,553	-				-1.6
2,180,559	+				+0.7
2,180,559	+				+1.1
2,180,560	-				-0.6
2,180,560	-				+0.4
2,180,560	-				+1.3
2,180,560	-				+0.5
2,180,561	+				-0.1
2,180,561	+				+0.3
2,180,561	+				+0.6
2,180,561	+				+2.9
2,180,561	+				+0.2
2,180,562	-				+0.4
2,180,562	-				+0.4
2,180,562	-				+0.4
2,180,562	-				-0.0
2,180,562	-				-1.2
2,180,562	-				-0.2
2,180,796	+		OLJFJH_10550	0.17	+2.2
2,180,833	+		OLJFJH_10550	0.18	+0.2
2,180,881	+		OLJFJH_10550	0.20	+1.8
2,180,882	-		OLJFJH_10550	0.20	-3.5
2,180,882	-		OLJFJH_10550	0.20	+0.8
2,180,915	-		OLJFJH_10550	0.22	-0.8
2,181,085	-		OLJFJH_10550	0.29	-1.6
2,181,099	+		OLJFJH_10550	0.30	+1.3
2,181,105	+		OLJFJH_10550	0.30	-1.7
2,181,106	-		OLJFJH_10550	0.30	-0.1
2,181,187	-		OLJFJH_10550	0.34	-0.2
2,181,275	-		OLJFJH_10550	0.38	+0.3
2,181,301	+		OLJFJH_10550	0.39	+2.1
2,181,302	-		OLJFJH_10550	0.39	-1.5
2,181,302	-		OLJFJH_10550	0.39	-2.1
2,181,323	+		OLJFJH_10550	0.40	+0.6
2,181,439	+		OLJFJH_10550	0.45	-1.2
2,181,440	-		OLJFJH_10550	0.45	+0.7
2,181,551	-		OLJFJH_10550	0.50	-0.5
2,181,551	-		OLJFJH_10550	0.50	-0.6
2,181,566	-		OLJFJH_10550	0.51	-3.1
2,181,574	+		OLJFJH_10550	0.51	+11.8
2,181,575	-		OLJFJH_10550	0.51	-0.9
2,181,579	-		OLJFJH_10550	0.51	-1.5
2,181,597	-		OLJFJH_10550	0.52	+0.6
2,181,612	+		OLJFJH_10550	0.53	+0.6
2,181,615	-		OLJFJH_10550	0.53	+0.3
2,181,615	-		OLJFJH_10550	0.53	+2.4
2,181,643	-		OLJFJH_10550	0.54	-3.4
2,181,673	+		OLJFJH_10550	0.56	-1.8
2,181,673	+		OLJFJH_10550	0.56	+0.5
2,181,673	+		OLJFJH_10550	0.56	-0.5
2,181,755	+		OLJFJH_10550	0.59	-0.4
2,181,760	+		OLJFJH_10550	0.59	+1.0
2,181,890	-		OLJFJH_10550	0.65	-0.7
2,181,920	-		OLJFJH_10550	0.67	-0.0
2,181,978	+		OLJFJH_10550	0.69	-1.5
2,181,992	+		OLJFJH_10550	0.70	-0.3
2,181,996	-		OLJFJH_10550	0.70	-2.2
2,181,996	-		OLJFJH_10550	0.70	+0.7
2,182,034	+		OLJFJH_10550	0.72	+2.8
2,182,034	+		OLJFJH_10550	0.72	+1.9
2,182,035	-		OLJFJH_10550	0.72	-3.0
2,182,037	-		OLJFJH_10550	0.72	-0.1
2,182,037	-		OLJFJH_10550	0.72	-0.1
2,182,126	+		OLJFJH_10550	0.76	+0.8
2,182,265	-		OLJFJH_10550	0.82	-2.6
2,182,320	+		OLJFJH_10550	0.84	+0.6
2,182,415	-		OLJFJH_10550	0.89	+2.3
2,182,415	-		OLJFJH_10550	0.89	+1.8
2,182,415	-		OLJFJH_10550	0.89	+2.6
2,182,444	+		OLJFJH_10550	0.90	+0.9
2,182,445	-		OLJFJH_10550	0.90	+0.4
2,182,445	-		OLJFJH_10550	0.90	-0.1
2,182,448	-				-1.8
2,182,478	-				-0.5
2,182,766	-		OLJFJH_10555	0.16	+0.9
2,182,793	-		OLJFJH_10555	0.21	+0.4
2,182,793	-		OLJFJH_10555	0.21	-2.4
2,182,793	-		OLJFJH_10555	0.21	-1.6
2,182,799	+		OLJFJH_10555	0.22	-1.1
2,182,800	-		OLJFJH_10555	0.22	+0.0
2,182,815	-		OLJFJH_10555	0.24	+0.4
2,182,847	-		OLJFJH_10555	0.29	+0.7
2,182,862	+		OLJFJH_10555	0.32	-0.3
2,182,863	-		OLJFJH_10555	0.32	-0.7
2,182,882	+		OLJFJH_10555	0.35	+0.8
2,182,882	+		OLJFJH_10555	0.35	-3.9
2,182,882	+		OLJFJH_10555	0.35	-0.7
2,182,883	-		OLJFJH_10555	0.35	-0.2
2,182,883	-		OLJFJH_10555	0.35	-0.6
2,182,883	-		OLJFJH_10555	0.35	-0.2
2,182,979	+		OLJFJH_10555	0.50	-0.0
2,182,980	-		OLJFJH_10555	0.50	+1.9
2,182,980	-		OLJFJH_10555	0.50	+0.4
2,182,980	-		OLJFJH_10555	0.50	+1.7
2,182,981	+		OLJFJH_10555	0.50	-1.7
2,182,981	+		OLJFJH_10555	0.50	-0.3
2,182,982	-		OLJFJH_10555	0.51	+1.0
2,182,982	-		OLJFJH_10555	0.51	-0.4
2,182,982	-		OLJFJH_10555	0.51	+0.7
2,183,003	+		OLJFJH_10555	0.54	-1.5
2,183,054	+		OLJFJH_10555	0.62	-0.0
2,183,087	+		OLJFJH_10555	0.67	+1.4
2,183,091	-		OLJFJH_10555	0.68	-2.9
2,183,124	-		OLJFJH_10555	0.73	+2.6
2,183,183	+		OLJFJH_10555	0.82	-0.4
2,183,184	-		OLJFJH_10555	0.82	+0.5
2,183,368	+				-1.8
2,183,470	-				+1.7
2,183,488	+				+1.7
2,183,516	+				+0.4
2,183,531	-				+0.8
2,183,577	-		OLJFJH_10560	0.12	+2.6
2,183,652	-		OLJFJH_10560	0.17	-0.7
2,183,658	+		OLJFJH_10560	0.18	-3.3
2,183,664	+		OLJFJH_10560	0.18	-1.3