Strain Fitness in Erwinia amylovora T8 around OLJFJH_10235

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
2,106,635	+		OLJFJH_10225	0.88	+1.2
2,106,636	-		OLJFJH_10225	0.88	-2.1
2,106,636	-		OLJFJH_10225	0.88	-0.5
2,106,638	+		OLJFJH_10225	0.89	-3.9
2,106,639	-		OLJFJH_10225	0.89	-1.9
2,106,639	-		OLJFJH_10225	0.89	+0.9
2,106,639	-		OLJFJH_10225	0.89	-0.1
2,106,723	-				+0.4
2,106,723	-				-2.6
2,106,725	+				-0.2
2,106,725	+				-1.7
2,106,725	+				-0.5
2,106,725	+				-2.6
2,106,725	+				+0.4
2,106,725	-				+2.0
2,106,726	-				+1.6
2,106,726	-				+0.1
2,106,726	-				-0.1
2,106,726	-				+0.2
2,106,726	-				-3.1
2,106,784	+				+1.2
2,106,857	-		OLJFJH_10230	0.25	-0.4
2,106,920	-		OLJFJH_10230	0.38	+2.4
2,106,986	+		OLJFJH_10230	0.52	+3.9
2,106,986	+		OLJFJH_10230	0.52	+3.2
2,106,986	+		OLJFJH_10230	0.52	+3.1
2,106,986	+		OLJFJH_10230	0.52	+0.4
2,106,986	+		OLJFJH_10230	0.52	-0.8
2,106,986	+		OLJFJH_10230	0.52	-0.4
2,106,986	+		OLJFJH_10230	0.52	+0.8
2,106,986	+		OLJFJH_10230	0.52	+3.0
2,106,987	-		OLJFJH_10230	0.52	-1.1
2,106,987	-		OLJFJH_10230	0.52	+1.2
2,106,987	-		OLJFJH_10230	0.52	+2.9
2,106,987	-		OLJFJH_10230	0.52	+0.6
2,106,988	+		OLJFJH_10230	0.53	+1.2
2,106,988	+		OLJFJH_10230	0.53	+2.2
2,106,988	+		OLJFJH_10230	0.53	+0.4
2,106,988	+		OLJFJH_10230	0.53	-0.4
2,106,988	+		OLJFJH_10230	0.53	+4.4
2,106,989	-		OLJFJH_10230	0.53	+1.4
2,107,479	+				-0.9
2,107,501	+				+1.4
2,107,509	-				-3.0
2,107,551	+				+0.5
2,107,551	+				-0.7
2,107,552	-				-1.9
2,107,565	+				-1.0
2,107,566	-				-1.0
2,107,583	-				-0.1
2,107,590	-				-4.3
2,107,641	+				-0.5
2,107,641	+				+0.6
2,107,683	-		OLJFJH_10235	0.12	+0.4
2,107,717	+		OLJFJH_10235	0.16	-2.3
2,107,735	+		OLJFJH_10235	0.18	+1.6
2,107,736	-		OLJFJH_10235	0.18	+0.0
2,107,885	+		OLJFJH_10235	0.37	+0.5
2,107,964	+		OLJFJH_10235	0.47	+0.0
2,108,005	+		OLJFJH_10235	0.52	-1.2
2,108,304	-		OLJFJH_10235	0.89	+2.4
2,108,319	+				+1.0
2,108,329	+				+1.2
2,108,336	+				-0.2
2,108,336	+				+0.4
2,108,336	+				-1.6
2,108,336	+				+0.5
2,108,336	+				+0.4
2,108,337	-				-0.4
2,108,391	+				-0.5
2,108,574	+				-0.6
2,108,575	-				+0.8
2,108,660	+				+0.5
2,108,664	+				-1.7
2,108,703	-				+0.5
2,108,703	-				-3.2
2,108,792	-		OLJFJH_10240	0.13	+2.4
2,108,855	+		OLJFJH_10240	0.20	+0.8
2,108,856	-		OLJFJH_10240	0.20	-0.1
2,108,884	+		OLJFJH_10240	0.23	-0.2
2,108,885	-		OLJFJH_10240	0.23	-1.1
2,108,885	-		OLJFJH_10240	0.23	+0.8
2,108,885	-		OLJFJH_10240	0.23	+0.7
2,108,915	+		OLJFJH_10240	0.26	+0.5
2,108,942	-		OLJFJH_10240	0.30	+1.2
2,108,942	-		OLJFJH_10240	0.30	+0.0
2,108,959	-		OLJFJH_10240	0.31	-3.3
2,108,959	-		OLJFJH_10240	0.31	-1.8
2,108,959	-		OLJFJH_10240	0.31	-3.9
2,109,030	+		OLJFJH_10240	0.39	-0.9
2,109,185	-		OLJFJH_10240	0.57	-0.7
2,109,201	+		OLJFJH_10240	0.59	+1.5
2,109,201	+		OLJFJH_10240	0.59	+1.8
2,109,202	-		OLJFJH_10240	0.59	+0.2
2,109,259	+		OLJFJH_10240	0.65	+0.1
2,109,259	+		OLJFJH_10240	0.65	-0.7
2,109,260	-		OLJFJH_10240	0.65	-0.2
2,109,263	-		OLJFJH_10240	0.66	+1.0
2,109,330	+		OLJFJH_10240	0.73	-0.4
2,109,331	-		OLJFJH_10240	0.73	-0.1
2,109,331	-		OLJFJH_10240	0.73	+0.6
2,109,392	+		OLJFJH_10240	0.80	-2.2
2,109,392	+		OLJFJH_10240	0.80	-2.0
2,109,393	-		OLJFJH_10240	0.80	-1.0