Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_08255 and OLJFJH_08260 are separated by 207 nucleotides OLJFJH_08260 and OLJFJH_08265 are separated by 11 nucleotides OLJFJH_08265 and OLJFJH_08270 are separated by 31 nucleotides
OLJFJH_08255: OLJFJH_08255 - DNA-binding transcriptional regulator AlpA, at 1,706,078 to 1,707,094
_08255
OLJFJH_08260: OLJFJH_08260 - DUF2345 domain-containing protein, at 1,707,302 to 1,707,571
_08260
OLJFJH_08265: OLJFJH_08265 - DUF3828 domain-containing protein, at 1,707,583 to 1,708,029
_08265
OLJFJH_08270: OLJFJH_08270 - Endochitinase 1 Flags:, at 1,708,061 to 1,710,955
_08270
Position (kb) 1707
1708 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5 at 1706.465 kb on + strand, within OLJFJH_08255 at 1706.465 kb on + strand, within OLJFJH_08255 at 1706.466 kb on - strand, within OLJFJH_08255 at 1706.466 kb on - strand, within OLJFJH_08255 at 1706.480 kb on - strand, within OLJFJH_08255 at 1706.532 kb on + strand, within OLJFJH_08255 at 1706.710 kb on + strand, within OLJFJH_08255 at 1707.018 kb on + strand at 1707.019 kb on - strand at 1707.046 kb on + strand at 1707.155 kb on - strand at 1707.299 kb on + strand at 1707.338 kb on - strand, within OLJFJH_08260 at 1707.490 kb on + strand, within OLJFJH_08260 at 1707.490 kb on + strand, within OLJFJH_08260 at 1707.491 kb on - strand, within OLJFJH_08260 at 1707.581 kb on + strand at 1707.621 kb on + strand at 1707.622 kb on - strand at 1707.714 kb on + strand, within OLJFJH_08265 at 1707.724 kb on - strand, within OLJFJH_08265 at 1707.863 kb on + strand, within OLJFJH_08265 at 1707.887 kb on + strand, within OLJFJH_08265 at 1708.170 kb on + strand at 1708.323 kb on + strand at 1708.397 kb on - strand, within OLJFJH_08270 at 1708.403 kb on + strand, within OLJFJH_08270 at 1708.404 kb on - strand, within OLJFJH_08270 at 1708.451 kb on + strand, within OLJFJH_08270 at 1708.556 kb on + strand, within OLJFJH_08270 at 1708.556 kb on + strand, within OLJFJH_08270 at 1708.557 kb on - strand, within OLJFJH_08270
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 1,706,465 + OLJFJH_08255 0.38 -0.4 1,706,465 + OLJFJH_08255 0.38 -3.6 1,706,466 - OLJFJH_08255 0.38 -2.0 1,706,466 - OLJFJH_08255 0.38 +0.1 1,706,480 - OLJFJH_08255 0.40 -1.6 1,706,532 + OLJFJH_08255 0.45 -0.9 1,706,710 + OLJFJH_08255 0.62 +1.4 1,707,018 + +5.6 1,707,019 - +1.2 1,707,046 + -0.2 1,707,155 - +1.0 1,707,299 + +0.6 1,707,338 - OLJFJH_08260 0.13 +1.9 1,707,490 + OLJFJH_08260 0.70 -1.8 1,707,490 + OLJFJH_08260 0.70 +1.3 1,707,491 - OLJFJH_08260 0.70 -1.6 1,707,581 + -1.0 1,707,621 + -0.0 1,707,622 - -3.0 1,707,714 + OLJFJH_08265 0.29 +1.1 1,707,724 - OLJFJH_08265 0.32 +0.7 1,707,863 + OLJFJH_08265 0.63 -0.9 1,707,887 + OLJFJH_08265 0.68 +0.1 1,708,170 + -0.5 1,708,323 + -2.5 1,708,397 - OLJFJH_08270 0.12 -0.3 1,708,403 + OLJFJH_08270 0.12 -2.5 1,708,404 - OLJFJH_08270 0.12 +0.9 1,708,451 + OLJFJH_08270 0.13 +0.0 1,708,556 + OLJFJH_08270 0.17 +0.6 1,708,556 + OLJFJH_08270 0.17 -2.3 1,708,557 - OLJFJH_08270 0.17 -1.9
Or see this region's nucleotide sequence