Strain Fitness in Erwinia amylovora T8 around OLJFJH_07640

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntOLJFJH_07635 and OLJFJH_07640 overlap by 28 nucleotidesOLJFJH_07640 and OLJFJH_07645 overlap by 4 nucleotides OLJFJH_07635: OLJFJH_07635 - bifunctional [glutamate--ammonia ligase]-adenylyl-L-tyrosine phosphorylase/[glutamate--ammonia-ligase] adenylyltransferase, at 1,559,824 to 1,562,658 _07635 OLJFJH_07640: OLJFJH_07640 - hypothetical protein, at 1,562,631 to 1,562,750 _07640 OLJFJH_07645: OLJFJH_07645 - bifunctional D-glycero-beta-D-manno-heptose-7-phosphate kinase/D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase HldE, at 1,562,747 to 1,564,183 _07645 Position (kb) 1562 1563Strain fitness (log2 ratio) -1 0 1 2 3at 1561.633 kb on - strand, within OLJFJH_07635at 1561.723 kb on - strand, within OLJFJH_07635at 1561.809 kb on + strand, within OLJFJH_07635at 1561.810 kb on - strand, within OLJFJH_07635at 1561.913 kb on - strand, within OLJFJH_07635at 1561.913 kb on - strand, within OLJFJH_07635at 1562.002 kb on + strand, within OLJFJH_07635at 1562.002 kb on + strand, within OLJFJH_07635at 1562.003 kb on - strand, within OLJFJH_07635at 1562.084 kb on + strand, within OLJFJH_07635at 1562.084 kb on + strand, within OLJFJH_07635at 1562.084 kb on + strand, within OLJFJH_07635at 1562.085 kb on - strand, within OLJFJH_07635at 1562.085 kb on - strand, within OLJFJH_07635at 1562.141 kb on - strand, within OLJFJH_07635at 1562.530 kb on + strandat 1562.530 kb on + strandat 1562.530 kb on + strandat 1562.530 kb on + strandat 1562.530 kb on + strandat 1562.531 kb on - strandat 1562.531 kb on - strandat 1562.531 kb on - strandat 1562.531 kb on - strandat 1562.624 kb on + strandat 1562.624 kb on + strandat 1562.625 kb on - strandat 1562.697 kb on + strand, within OLJFJH_07640at 1562.698 kb on - strand, within OLJFJH_07640at 1562.698 kb on - strand, within OLJFJH_07640at 1562.702 kb on + strand, within OLJFJH_07640at 1562.702 kb on + strand, within OLJFJH_07640at 1562.702 kb on + strand, within OLJFJH_07640

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Per-strain Table

Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
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1,561,633 - OLJFJH_07635 0.64 +1.5
1,561,723 - OLJFJH_07635 0.67 +0.3
1,561,809 + OLJFJH_07635 0.70 +0.5
1,561,810 - OLJFJH_07635 0.70 -0.6
1,561,913 - OLJFJH_07635 0.74 +1.0
1,561,913 - OLJFJH_07635 0.74 +1.2
1,562,002 + OLJFJH_07635 0.77 -0.6
1,562,002 + OLJFJH_07635 0.77 -1.7
1,562,003 - OLJFJH_07635 0.77 -1.6
1,562,084 + OLJFJH_07635 0.80 -0.2
1,562,084 + OLJFJH_07635 0.80 -0.1
1,562,084 + OLJFJH_07635 0.80 +1.6
1,562,085 - OLJFJH_07635 0.80 +0.6
1,562,085 - OLJFJH_07635 0.80 +0.5
1,562,141 - OLJFJH_07635 0.82 -1.4
1,562,530 + +2.4
1,562,530 + +0.8
1,562,530 + +0.5
1,562,530 + +0.6
1,562,530 + -1.2
1,562,531 - -0.2
1,562,531 - -0.5
1,562,531 - -1.2
1,562,531 - +0.7
1,562,624 + +0.2
1,562,624 + -0.6
1,562,625 - +0.4
1,562,697 + OLJFJH_07640 0.55 -0.2
1,562,698 - OLJFJH_07640 0.56 +1.2
1,562,698 - OLJFJH_07640 0.56 +0.6
1,562,702 + OLJFJH_07640 0.59 -1.5
1,562,702 + OLJFJH_07640 0.59 -1.1
1,562,702 + OLJFJH_07640 0.59 +3.5

Or see this region's nucleotide sequence