Strain Fitness in Erwinia amylovora T8 around OLJFJH_06310

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
1,278,006	+		OLJFJH_06300	0.89	+1.8
1,278,007	-		OLJFJH_06300	0.90	+0.4
1,278,025	-				-4.0
1,278,090	-				-1.8
1,278,100	-				+0.3
1,278,100	-				+0.4
1,278,112	-				+0.1
1,278,202	-				-3.4
1,278,219	+		OLJFJH_06305	0.12	+0.8
1,278,220	-		OLJFJH_06305	0.12	+0.9
1,278,220	-		OLJFJH_06305	0.12	+0.2
1,278,220	-		OLJFJH_06305	0.12	-1.5
1,278,270	-		OLJFJH_06305	0.17	-2.0
1,278,270	-		OLJFJH_06305	0.17	-0.1
1,278,341	+		OLJFJH_06305	0.25	+0.6
1,278,341	+		OLJFJH_06305	0.25	+0.1
1,278,341	+		OLJFJH_06305	0.25	-0.9
1,278,342	-		OLJFJH_06305	0.26	+0.3
1,278,342	-		OLJFJH_06305	0.26	-3.3
1,278,342	-		OLJFJH_06305	0.26	+0.9
1,278,346	-		OLJFJH_06305	0.26	-3.2
1,278,346	-		OLJFJH_06305	0.26	-0.4
1,278,386	+		OLJFJH_06305	0.30	+0.6
1,278,386	+		OLJFJH_06305	0.30	+0.5
1,278,443	+		OLJFJH_06305	0.37	-0.6
1,278,444	-		OLJFJH_06305	0.37	-2.7
1,278,444	-		OLJFJH_06305	0.37	-2.5
1,278,444	-		OLJFJH_06305	0.37	-0.2
1,278,636	+		OLJFJH_06305	0.59	+0.2
1,278,655	+		OLJFJH_06305	0.61	-0.1
1,278,656	-		OLJFJH_06305	0.61	+0.8
1,278,726	+		OLJFJH_06305	0.69	-0.1
1,278,726	+		OLJFJH_06305	0.69	-1.9
1,278,727	-		OLJFJH_06305	0.69	+1.0
1,278,758	-		OLJFJH_06305	0.73	-2.5
1,278,758	-		OLJFJH_06305	0.73	-0.3
1,278,824	+		OLJFJH_06305	0.80	+0.2
1,278,827	-		OLJFJH_06305	0.80	+1.0
1,278,957	+				-1.1
1,278,957	+				-1.1
1,278,957	+				-1.4
1,278,958	-				-1.1
1,278,993	+				-0.3
1,278,994	-				-1.9
1,279,172	+		OLJFJH_06310	0.28	+1.0
1,279,173	-		OLJFJH_06310	0.28	-0.0
1,279,251	+		OLJFJH_06310	0.39	+0.5
1,279,251	+		OLJFJH_06310	0.39	+1.9
1,279,343	-		OLJFJH_06310	0.52	+0.9
1,279,431	+		OLJFJH_06310	0.65	+1.4
1,279,615	+				-0.1
1,279,658	+				+1.4
1,279,658	+				+0.1
1,279,658	+				-0.1
1,279,659	-				-2.5
1,279,659	-				+0.2
1,279,659	-				-0.3
1,279,659	-				+0.2
1,279,659	-				+2.0
1,279,659	-				-3.3
1,279,661	-				-3.3
1,279,661	-				-5.0
1,279,662	+				+1.0
1,279,663	-				-0.8
1,279,663	-				+1.2
1,279,663	-				-0.8
1,279,670	+				-1.7
1,279,670	+				+1.6
1,279,671	-				+1.4
1,279,671	-				-0.4
1,279,714	+				+1.4
1,279,714	+				+0.6
1,279,714	+				+1.0
1,279,715	-				-2.5
1,279,715	-				+0.6
1,279,719	+				-0.3
1,279,720	-				-1.1
1,279,720	-				+0.3
1,279,814	+		OLJFJH_06315	0.12	-1.6
1,279,898	+		OLJFJH_06315	0.20	+2.3
1,279,908	+		OLJFJH_06315	0.21	+1.7
1,279,908	+		OLJFJH_06315	0.21	+0.0
1,279,909	-		OLJFJH_06315	0.21	-3.7
1,279,911	-		OLJFJH_06315	0.21	+0.3
1,279,940	-		OLJFJH_06315	0.24	-0.7
1,280,154	+		OLJFJH_06315	0.42	-2.6
1,280,155	-		OLJFJH_06315	0.43	-0.2
1,280,220	+		OLJFJH_06315	0.48	-0.7
1,280,220	+		OLJFJH_06315	0.48	+1.6
1,280,221	-		OLJFJH_06315	0.48	-1.7
1,280,222	+		OLJFJH_06315	0.48	-3.5
1,280,339	+		OLJFJH_06315	0.59	-0.8
1,280,343	+		OLJFJH_06315	0.59	-2.3
1,280,343	+		OLJFJH_06315	0.59	-2.3
1,280,343	+		OLJFJH_06315	0.59	-0.5
1,280,343	+		OLJFJH_06315	0.59	-0.6
1,280,344	-		OLJFJH_06315	0.59	+0.7
1,280,344	-		OLJFJH_06315	0.59	+0.5
1,280,370	+		OLJFJH_06315	0.62	+0.8
1,280,463	+		OLJFJH_06315	0.70	-1.3
1,280,464	-		OLJFJH_06315	0.70	-0.7
1,280,546	+		OLJFJH_06315	0.77	-0.1
1,280,546	+		OLJFJH_06315	0.77	+0.2
1,280,546	+		OLJFJH_06315	0.77	-1.2
1,280,546	+		OLJFJH_06315	0.77	-1.6
1,280,547	-		OLJFJH_06315	0.77	-0.8
1,280,547	-		OLJFJH_06315	0.77	-1.1
1,280,547	-		OLJFJH_06315	0.77	-1.8
1,280,547	-		OLJFJH_06315	0.77	-0.1
1,280,547	-		OLJFJH_06315	0.77	-2.3
1,280,635	-		OLJFJH_06315	0.85	+0.4
1,280,635	-		OLJFJH_06315	0.85	+0.1
1,280,635	-		OLJFJH_06315	0.85	+3.5