Strain Fitness in Erwinia amylovora T8 around OLJFJH_05625

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
1,144,824	+		OLJFJH_05620	0.20	+0.1
1,144,991	-		OLJFJH_05620	0.49	+0.1
1,145,073	+		OLJFJH_05620	0.63	-1.8
1,145,074	-		OLJFJH_05620	0.63	-0.9
1,145,074	-		OLJFJH_05620	0.63	-0.6
1,145,074	-		OLJFJH_05620	0.63	+1.2
1,145,078	-		OLJFJH_05620	0.64	+1.8
1,145,078	-		OLJFJH_05620	0.64	+0.2
1,145,078	-		OLJFJH_05620	0.64	+2.0
1,145,078	-		OLJFJH_05620	0.64	+0.5
1,145,357	+				-1.2
1,145,518	+				+0.4
1,145,519	-				-2.0
1,145,530	+				+2.2
1,145,574	-				+0.3
1,145,596	-				+0.9
1,145,774	+				+0.9
1,145,774	+				-1.4
1,145,775	-				-0.3
1,145,868	-		OLJFJH_05625	0.15	+0.2
1,145,868	-		OLJFJH_05625	0.15	+2.1
1,145,869	+		OLJFJH_05625	0.15	+2.0
1,145,870	-		OLJFJH_05625	0.15	-3.0
1,145,988	+		OLJFJH_05625	0.29	-2.0
1,145,989	-		OLJFJH_05625	0.29	+0.5
1,146,031	+		OLJFJH_05625	0.34	+3.4
1,146,032	-		OLJFJH_05625	0.34	-0.1
1,146,146	+		OLJFJH_05625	0.47	+8.7
1,146,146	+		OLJFJH_05625	0.47	+1.1
1,146,147	-		OLJFJH_05625	0.47	+0.1
1,146,149	-		OLJFJH_05625	0.47	-0.3
1,146,239	-		OLJFJH_05625	0.57	+0.0
1,146,515	+		OLJFJH_05625	0.88	-3.3
1,146,515	+		OLJFJH_05625	0.88	-0.3
1,146,740	-				-0.2
1,147,031	+		OLJFJH_05630	0.29	+0.5
1,147,311	-		OLJFJH_05630	0.69	-1.2