Strain Fitness in Erwinia amylovora T8 around OLJFJH_05060

Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
1,004,079	+				+0.8
1,004,079	+				-0.4
1,004,080	-				-1.8
1,004,081	+				-0.4
1,004,081	+				-0.5
1,004,203	+		OLJFJH_05055	0.11	-1.3
1,004,260	+		OLJFJH_05055	0.17	-0.3
1,004,309	-		OLJFJH_05055	0.23	-0.2
1,004,309	-		OLJFJH_05055	0.23	-0.3
1,004,559	-		OLJFJH_05055	0.50	-1.5
1,004,559	-		OLJFJH_05055	0.50	-0.5
1,004,568	+		OLJFJH_05055	0.51	-0.4
1,004,568	+		OLJFJH_05055	0.51	-0.0
1,004,568	+		OLJFJH_05055	0.51	+0.0
1,004,728	+		OLJFJH_05055	0.69	+0.1
1,004,782	-		OLJFJH_05055	0.75	-0.7
1,004,865	+		OLJFJH_05055	0.84	+0.6
1,004,996	+				-2.1
1,005,029	+				-0.5
1,005,033	+				+0.9
1,005,034	-				+0.5
1,005,034	-				+1.4
1,005,034	-				+0.9
1,005,045	+				-0.2
1,005,045	+				+1.2
1,005,045	+				-2.1
1,005,046	-				-0.6
1,005,046	-				+2.4
1,005,141	+		OLJFJH_05060	0.21	+8.7
1,005,141	+		OLJFJH_05060	0.21	+0.3
1,005,141	+		OLJFJH_05060	0.21	-0.2
1,005,141	+		OLJFJH_05060	0.21	-2.2
1,005,197	+		OLJFJH_05060	0.30	-0.0
1,005,313	+		OLJFJH_05060	0.49	-0.1
1,005,314	-		OLJFJH_05060	0.49	+0.6
1,005,314	-		OLJFJH_05060	0.49	+0.2
1,005,633	-				-2.4
1,005,633	-				+0.8
1,005,695	+				-0.5
1,005,696	-				+1.0
1,005,696	-				+1.2
1,005,696	-				-0.9
1,005,696	-				+1.1
1,005,705	-				-3.0
1,005,705	-				+1.1
1,005,750	+		OLJFJH_05065	0.16	+0.3
1,005,750	+		OLJFJH_05065	0.16	+0.1
1,005,808	-		OLJFJH_05065	0.26	+0.8
1,005,824	+		OLJFJH_05065	0.29	+1.2
1,005,943	+		OLJFJH_05065	0.50	-1.6
1,005,944	-		OLJFJH_05065	0.51	+2.9
1,006,003	+		OLJFJH_05065	0.61	-1.8
1,006,004	-		OLJFJH_05065	0.61	-3.1
1,006,046	-		OLJFJH_05065	0.69	-0.7
1,006,062	+		OLJFJH_05065	0.71	+0.9
1,006,153	+		OLJFJH_05065	0.88	-1.5
1,006,153	+		OLJFJH_05065	0.88	+0.8
1,006,154	-		OLJFJH_05065	0.88	+0.2
1,006,154	-		OLJFJH_05065	0.88	+0.0
1,006,279	+				-0.2
1,006,279	+				-2.9
1,006,280	-				+0.6
1,006,280	-				-1.4
1,006,400	-				-3.9
1,006,571	+		OLJFJH_05070	0.36	-0.6
1,006,574	+		OLJFJH_05070	0.36	-1.6
1,006,574	+		OLJFJH_05070	0.36	+0.7
1,006,574	+		OLJFJH_05070	0.36	-1.6
1,006,574	+		OLJFJH_05070	0.36	-1.0
1,006,574	+		OLJFJH_05070	0.36	-1.4
1,006,575	-		OLJFJH_05070	0.36	+0.7
1,006,575	-		OLJFJH_05070	0.36	-4.4
1,006,575	-		OLJFJH_05070	0.36	+1.1
1,006,575	-		OLJFJH_05070	0.36	+0.3
1,006,575	-		OLJFJH_05070	0.36	-1.4
1,006,575	-		OLJFJH_05070	0.36	-0.9
1,006,576	+		OLJFJH_05070	0.36	-0.5
1,006,576	+		OLJFJH_05070	0.36	+0.3
1,006,576	+		OLJFJH_05070	0.36	+0.7
1,006,577	-		OLJFJH_05070	0.36	+0.1