Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04970 and OLJFJH_04975 are separated by 42 nucleotides OLJFJH_04975 and OLJFJH_04980 are separated by 332 nucleotides
OLJFJH_04970: OLJFJH_04970 - hydroxyacid dehydrogenase, at 985,244 to 986,290
_04970
OLJFJH_04975: OLJFJH_04975 - HTH-type transcriptional regulator, at 986,333 to 986,626
_04975
OLJFJH_04980: OLJFJH_04980 - DUF3053 domain-containing protein, at 986,959 to 987,675
_04980
Position (kb) 986
987 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3
4
5
6
7
8
9 at 985.343 kb on - strand at 985.346 kb on + strand at 985.346 kb on + strand at 985.346 kb on + strand at 985.347 kb on - strand at 985.347 kb on - strand at 985.586 kb on + strand, within OLJFJH_04970 at 985.670 kb on - strand, within OLJFJH_04970 at 985.670 kb on - strand, within OLJFJH_04970 at 985.929 kb on + strand, within OLJFJH_04970 at 986.003 kb on + strand, within OLJFJH_04970 at 986.065 kb on + strand, within OLJFJH_04970 at 986.066 kb on - strand, within OLJFJH_04970 at 986.066 kb on - strand, within OLJFJH_04970 at 986.091 kb on + strand, within OLJFJH_04970 at 986.091 kb on + strand, within OLJFJH_04970 at 986.095 kb on + strand, within OLJFJH_04970 at 986.132 kb on - strand, within OLJFJH_04970 at 986.289 kb on - strand at 986.334 kb on + strand at 986.335 kb on - strand at 986.528 kb on - strand, within OLJFJH_04975 at 986.576 kb on + strand, within OLJFJH_04975 at 986.576 kb on + strand, within OLJFJH_04975 at 986.576 kb on + strand, within OLJFJH_04975 at 986.640 kb on + strand at 986.641 kb on - strand at 986.641 kb on - strand at 986.650 kb on + strand at 986.673 kb on - strand at 986.762 kb on + strand at 986.763 kb on - strand at 986.763 kb on - strand at 986.765 kb on + strand at 986.797 kb on - strand at 986.958 kb on + strand at 986.972 kb on + strand at 987.007 kb on - strand at 987.160 kb on + strand, within OLJFJH_04980 at 987.160 kb on + strand, within OLJFJH_04980 at 987.160 kb on + strand, within OLJFJH_04980 at 987.160 kb on + strand, within OLJFJH_04980 at 987.161 kb on - strand, within OLJFJH_04980 at 987.161 kb on - strand, within OLJFJH_04980 at 987.161 kb on - strand, within OLJFJH_04980 at 987.161 kb on - strand, within OLJFJH_04980 at 987.275 kb on - strand, within OLJFJH_04980 at 987.369 kb on + strand, within OLJFJH_04980 at 987.423 kb on + strand, within OLJFJH_04980 at 987.427 kb on - strand, within OLJFJH_04980 at 987.593 kb on - strand, within OLJFJH_04980 at 987.610 kb on - strand at 987.610 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 985,343 - -2.0 985,346 + +2.1 985,346 + -0.4 985,346 + +2.5 985,347 - -0.2 985,347 - -0.4 985,586 + OLJFJH_04970 0.33 +1.8 985,670 - OLJFJH_04970 0.41 +0.0 985,670 - OLJFJH_04970 0.41 -1.4 985,929 + OLJFJH_04970 0.65 -0.1 986,003 + OLJFJH_04970 0.72 +1.0 986,065 + OLJFJH_04970 0.78 -1.0 986,066 - OLJFJH_04970 0.79 +0.6 986,066 - OLJFJH_04970 0.79 +0.3 986,091 + OLJFJH_04970 0.81 -1.3 986,091 + OLJFJH_04970 0.81 -1.2 986,095 + OLJFJH_04970 0.81 -0.2 986,132 - OLJFJH_04970 0.85 +0.8 986,289 - -0.2 986,334 + +9.1 986,335 - -0.0 986,528 - OLJFJH_04975 0.66 +0.7 986,576 + OLJFJH_04975 0.83 -0.1 986,576 + OLJFJH_04975 0.83 +1.2 986,576 + OLJFJH_04975 0.83 +1.0 986,640 + -0.8 986,641 - +1.6 986,641 - -1.7 986,650 + -0.8 986,673 - -0.6 986,762 + -1.7 986,763 - -3.7 986,763 - -2.2 986,765 + +0.5 986,797 - -0.8 986,958 + +0.6 986,972 + +0.4 987,007 - -3.1 987,160 + OLJFJH_04980 0.28 +0.4 987,160 + OLJFJH_04980 0.28 +1.3 987,160 + OLJFJH_04980 0.28 -2.1 987,160 + OLJFJH_04980 0.28 -0.2 987,161 - OLJFJH_04980 0.28 +0.1 987,161 - OLJFJH_04980 0.28 -0.9 987,161 - OLJFJH_04980 0.28 +0.5 987,161 - OLJFJH_04980 0.28 +0.3 987,275 - OLJFJH_04980 0.44 +1.8 987,369 + OLJFJH_04980 0.57 -0.9 987,423 + OLJFJH_04980 0.65 -0.9 987,427 - OLJFJH_04980 0.65 +0.4 987,593 - OLJFJH_04980 0.88 -0.2 987,610 - +1.0 987,610 - +1.0
Or see this region's nucleotide sequence