Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_04840 and OLJFJH_04845 are separated by 87 nucleotides OLJFJH_04845 and OLJFJH_04850 overlap by 10 nucleotides
OLJFJH_04840: OLJFJH_04840 - cellulose synthase, at 957,258 to 959,357
_04840
OLJFJH_04845: OLJFJH_04845 - cellulose biosynthesis protein BcsQ, at 959,445 to 960,242
_04845
OLJFJH_04850: OLJFJH_04850 - cellulose biosynthesis protein BcsO, at 960,233 to 960,763
_04850
Position (kb) 959
960
961 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 958.549 kb on + strand, within OLJFJH_04840 at 958.549 kb on + strand, within OLJFJH_04840 at 958.596 kb on - strand, within OLJFJH_04840 at 958.624 kb on + strand, within OLJFJH_04840 at 958.638 kb on + strand, within OLJFJH_04840 at 958.743 kb on - strand, within OLJFJH_04840 at 958.805 kb on + strand, within OLJFJH_04840 at 958.807 kb on + strand, within OLJFJH_04840 at 958.807 kb on + strand, within OLJFJH_04840 at 958.808 kb on - strand, within OLJFJH_04840 at 958.808 kb on - strand, within OLJFJH_04840 at 958.808 kb on - strand, within OLJFJH_04840 at 958.871 kb on - strand, within OLJFJH_04840 at 958.884 kb on - strand, within OLJFJH_04840 at 958.884 kb on - strand, within OLJFJH_04840 at 958.902 kb on - strand, within OLJFJH_04840 at 958.932 kb on + strand, within OLJFJH_04840 at 958.963 kb on + strand, within OLJFJH_04840 at 958.963 kb on + strand, within OLJFJH_04840 at 958.963 kb on + strand, within OLJFJH_04840 at 958.963 kb on + strand, within OLJFJH_04840 at 958.964 kb on - strand, within OLJFJH_04840 at 958.964 kb on - strand, within OLJFJH_04840 at 959.058 kb on + strand, within OLJFJH_04840 at 959.061 kb on - strand, within OLJFJH_04840 at 959.089 kb on - strand, within OLJFJH_04840 at 959.089 kb on - strand, within OLJFJH_04840 at 959.156 kb on + strand at 959.157 kb on - strand at 959.229 kb on + strand at 959.264 kb on + strand at 959.265 kb on - strand at 959.339 kb on - strand at 959.352 kb on - strand at 959.377 kb on - strand at 959.387 kb on + strand at 959.388 kb on - strand at 959.454 kb on - strand at 959.499 kb on + strand at 959.507 kb on + strand at 959.678 kb on + strand, within OLJFJH_04845 at 959.679 kb on - strand, within OLJFJH_04845 at 959.879 kb on + strand, within OLJFJH_04845 at 959.909 kb on + strand, within OLJFJH_04845 at 959.909 kb on + strand, within OLJFJH_04845 at 960.123 kb on + strand, within OLJFJH_04845 at 960.124 kb on - strand, within OLJFJH_04845 at 960.124 kb on - strand, within OLJFJH_04845 at 960.124 kb on - strand, within OLJFJH_04845 at 960.149 kb on + strand, within OLJFJH_04845 at 960.150 kb on - strand, within OLJFJH_04845 at 960.216 kb on - strand at 960.235 kb on - strand at 960.454 kb on + strand, within OLJFJH_04850 at 960.454 kb on + strand, within OLJFJH_04850 at 960.455 kb on - strand, within OLJFJH_04850 at 960.455 kb on - strand, within OLJFJH_04850 at 960.607 kb on + strand, within OLJFJH_04850 at 960.701 kb on - strand, within OLJFJH_04850 at 960.767 kb on + strand at 960.826 kb on - strand at 960.826 kb on - strand at 960.911 kb on - strand at 960.915 kb on - strand at 960.954 kb on + strand at 961.018 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 958,549 + OLJFJH_04840 0.61 +0.6 958,549 + OLJFJH_04840 0.61 +0.1 958,596 - OLJFJH_04840 0.64 +0.6 958,624 + OLJFJH_04840 0.65 +1.4 958,638 + OLJFJH_04840 0.66 +0.7 958,743 - OLJFJH_04840 0.71 +1.0 958,805 + OLJFJH_04840 0.74 +0.5 958,807 + OLJFJH_04840 0.74 +1.0 958,807 + OLJFJH_04840 0.74 -0.5 958,808 - OLJFJH_04840 0.74 +0.1 958,808 - OLJFJH_04840 0.74 +0.2 958,808 - OLJFJH_04840 0.74 +0.7 958,871 - OLJFJH_04840 0.77 +1.0 958,884 - OLJFJH_04840 0.77 -2.7 958,884 - OLJFJH_04840 0.77 -3.3 958,902 - OLJFJH_04840 0.78 +1.5 958,932 + OLJFJH_04840 0.80 -0.1 958,963 + OLJFJH_04840 0.81 +0.1 958,963 + OLJFJH_04840 0.81 +2.0 958,963 + OLJFJH_04840 0.81 +0.6 958,963 + OLJFJH_04840 0.81 +0.5 958,964 - OLJFJH_04840 0.81 +0.7 958,964 - OLJFJH_04840 0.81 +1.5 959,058 + OLJFJH_04840 0.86 -0.9 959,061 - OLJFJH_04840 0.86 -0.0 959,089 - OLJFJH_04840 0.87 -0.2 959,089 - OLJFJH_04840 0.87 +2.2 959,156 + +2.2 959,157 - +0.2 959,229 + +0.7 959,264 + +0.5 959,265 - +0.2 959,339 - +0.4 959,352 - -0.6 959,377 - +1.0 959,387 + -0.0 959,388 - -2.4 959,454 - -1.1 959,499 + -0.0 959,507 + +2.7 959,678 + OLJFJH_04845 0.29 -1.8 959,679 - OLJFJH_04845 0.29 +0.3 959,879 + OLJFJH_04845 0.54 +1.6 959,909 + OLJFJH_04845 0.58 +0.8 959,909 + OLJFJH_04845 0.58 +1.8 960,123 + OLJFJH_04845 0.85 +0.7 960,124 - OLJFJH_04845 0.85 +0.9 960,124 - OLJFJH_04845 0.85 +0.6 960,124 - OLJFJH_04845 0.85 +3.4 960,149 + OLJFJH_04845 0.88 +2.4 960,150 - OLJFJH_04845 0.88 +1.4 960,216 - -0.8 960,235 - +0.1 960,454 + OLJFJH_04850 0.42 +1.3 960,454 + OLJFJH_04850 0.42 +0.8 960,455 - OLJFJH_04850 0.42 +0.5 960,455 - OLJFJH_04850 0.42 -1.2 960,607 + OLJFJH_04850 0.70 +2.0 960,701 - OLJFJH_04850 0.88 +0.0 960,767 + +1.0 960,826 - +0.6 960,826 - +1.1 960,911 - +0.4 960,915 - +1.3 960,954 + +0.2 961,018 - +0.8
Or see this region's nucleotide sequence