Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03525 and OLJFJH_03530 are separated by 551 nucleotides OLJFJH_03530 and OLJFJH_03535 are separated by 113 nucleotides OLJFJH_03535 and OLJFJH_03540 are separated by 118 nucleotides OLJFJH_03540 and OLJFJH_03545 are separated by 39 nucleotides
OLJFJH_03525: OLJFJH_03525 - Conserved uncharacterized protein, at 680,960 to 681,970
_03525
OLJFJH_03530: OLJFJH_03530 - hypothetical protein, at 682,522 to 682,917
_03530
OLJFJH_03535: OLJFJH_03535 - hypothetical protein, at 683,031 to 683,342
_03535
OLJFJH_03540: OLJFJH_03540 - antitermination protein Q, at 683,461 to 683,823
_03540
OLJFJH_03545: OLJFJH_03545 - HNH endonuclease, at 683,863 to 684,450
_03545
Position (kb) 682
683 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 681.823 kb on + strand, within OLJFJH_03525 at 681.843 kb on + strand, within OLJFJH_03525 at 681.843 kb on + strand, within OLJFJH_03525 at 681.843 kb on + strand, within OLJFJH_03525 at 681.844 kb on - strand, within OLJFJH_03525 at 681.844 kb on - strand, within OLJFJH_03525 at 681.847 kb on + strand, within OLJFJH_03525 at 681.849 kb on + strand, within OLJFJH_03525 at 681.850 kb on - strand, within OLJFJH_03525 at 681.864 kb on + strand, within OLJFJH_03525 at 681.888 kb on + strand at 681.896 kb on - strand at 681.950 kb on + strand at 681.950 kb on + strand at 681.951 kb on - strand at 681.953 kb on - strand at 682.377 kb on + strand at 682.534 kb on - strand at 682.553 kb on + strand at 682.620 kb on + strand, within OLJFJH_03530 at 682.901 kb on + strand at 682.902 kb on - strand at 683.027 kb on + strand at 683.201 kb on + strand, within OLJFJH_03535 at 683.301 kb on - strand, within OLJFJH_03535 at 683.590 kb on - strand, within OLJFJH_03540 at 683.590 kb on - strand, within OLJFJH_03540 at 683.598 kb on + strand, within OLJFJH_03540 at 683.600 kb on + strand, within OLJFJH_03540 at 683.601 kb on - strand, within OLJFJH_03540 at 683.601 kb on - strand, within OLJFJH_03540 at 683.815 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 681,823 + OLJFJH_03525 0.85 -0.2 681,843 + OLJFJH_03525 0.87 +0.3 681,843 + OLJFJH_03525 0.87 +0.6 681,843 + OLJFJH_03525 0.87 +0.4 681,844 - OLJFJH_03525 0.87 -1.5 681,844 - OLJFJH_03525 0.87 +0.4 681,847 + OLJFJH_03525 0.88 -1.2 681,849 + OLJFJH_03525 0.88 -0.2 681,850 - OLJFJH_03525 0.88 -0.3 681,864 + OLJFJH_03525 0.89 +1.0 681,888 + -0.9 681,896 - -3.4 681,950 + +1.8 681,950 + +0.9 681,951 - -2.2 681,953 - -0.2 682,377 + -1.5 682,534 - +3.5 682,553 + +1.8 682,620 + OLJFJH_03530 0.25 +0.7 682,901 + -0.4 682,902 - +0.9 683,027 + -1.1 683,201 + OLJFJH_03535 0.54 -2.5 683,301 - OLJFJH_03535 0.87 +0.0 683,590 - OLJFJH_03540 0.36 +0.0 683,590 - OLJFJH_03540 0.36 +1.8 683,598 + OLJFJH_03540 0.38 -0.2 683,600 + OLJFJH_03540 0.38 +1.1 683,601 - OLJFJH_03540 0.39 -0.7 683,601 - OLJFJH_03540 0.39 +0.9 683,815 - -0.5
Or see this region's nucleotide sequence