Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_03165 and OLJFJH_03170 are separated by 224 nucleotides OLJFJH_03170 and OLJFJH_03175 are separated by 23 nucleotides OLJFJH_03175 and OLJFJH_03180 are separated by 4 nucleotides
OLJFJH_03165: OLJFJH_03165 - Conserved uncharacterized protein, at 585,463 to 586,569
_03165
OLJFJH_03170: OLJFJH_03170 - hypothetical protein, at 586,794 to 587,225
_03170
OLJFJH_03175: OLJFJH_03175 - botulinum toxin, at 587,249 to 588,526
_03175
OLJFJH_03180: OLJFJH_03180 - Clostridium P-47 protein, at 588,531 to 590,144
_03180
Position (kb) 587
588
589 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 586.278 kb on + strand, within OLJFJH_03165 at 586.279 kb on - strand, within OLJFJH_03165 at 586.281 kb on - strand, within OLJFJH_03165 at 586.411 kb on - strand, within OLJFJH_03165 at 586.493 kb on - strand at 586.928 kb on + strand, within OLJFJH_03170 at 587.522 kb on + strand, within OLJFJH_03175 at 587.522 kb on + strand, within OLJFJH_03175 at 587.523 kb on - strand, within OLJFJH_03175 at 587.562 kb on + strand, within OLJFJH_03175 at 587.687 kb on - strand, within OLJFJH_03175 at 587.705 kb on + strand, within OLJFJH_03175 at 587.898 kb on - strand, within OLJFJH_03175 at 587.936 kb on + strand, within OLJFJH_03175 at 587.936 kb on + strand, within OLJFJH_03175 at 587.950 kb on - strand, within OLJFJH_03175 at 588.094 kb on + strand, within OLJFJH_03175 at 588.139 kb on + strand, within OLJFJH_03175 at 588.140 kb on - strand, within OLJFJH_03175 at 588.184 kb on + strand, within OLJFJH_03175 at 588.184 kb on + strand, within OLJFJH_03175 at 588.184 kb on + strand, within OLJFJH_03175 at 588.185 kb on - strand, within OLJFJH_03175 at 588.203 kb on - strand, within OLJFJH_03175 at 588.463 kb on + strand at 588.463 kb on + strand at 588.500 kb on + strand at 588.500 kb on + strand at 588.501 kb on - strand at 588.501 kb on - strand at 588.501 kb on - strand at 588.516 kb on + strand at 588.517 kb on - strand at 588.517 kb on - strand at 588.596 kb on + strand at 588.596 kb on + strand at 588.599 kb on + strand at 588.605 kb on + strand at 588.657 kb on - strand at 588.680 kb on + strand at 588.929 kb on - strand, within OLJFJH_03180 at 589.029 kb on + strand, within OLJFJH_03180 at 589.096 kb on - strand, within OLJFJH_03180 at 589.100 kb on + strand, within OLJFJH_03180 at 589.100 kb on + strand, within OLJFJH_03180 at 589.101 kb on - strand, within OLJFJH_03180 at 589.186 kb on + strand, within OLJFJH_03180 at 589.186 kb on + strand, within OLJFJH_03180 at 589.315 kb on - strand, within OLJFJH_03180
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 586,278 + OLJFJH_03165 0.74 -0.7 586,279 - OLJFJH_03165 0.74 -2.0 586,281 - OLJFJH_03165 0.74 +1.3 586,411 - OLJFJH_03165 0.86 -1.4 586,493 - -3.9 586,928 + OLJFJH_03170 0.31 -2.7 587,522 + OLJFJH_03175 0.21 -0.3 587,522 + OLJFJH_03175 0.21 +0.6 587,523 - OLJFJH_03175 0.21 -2.9 587,562 + OLJFJH_03175 0.24 -1.9 587,687 - OLJFJH_03175 0.34 +0.4 587,705 + OLJFJH_03175 0.36 -0.5 587,898 - OLJFJH_03175 0.51 +0.2 587,936 + OLJFJH_03175 0.54 +0.8 587,936 + OLJFJH_03175 0.54 +1.5 587,950 - OLJFJH_03175 0.55 -3.9 588,094 + OLJFJH_03175 0.66 -0.3 588,139 + OLJFJH_03175 0.70 +0.7 588,140 - OLJFJH_03175 0.70 -1.6 588,184 + OLJFJH_03175 0.73 +0.4 588,184 + OLJFJH_03175 0.73 +0.7 588,184 + OLJFJH_03175 0.73 +2.0 588,185 - OLJFJH_03175 0.73 +0.1 588,203 - OLJFJH_03175 0.75 -0.3 588,463 + -0.1 588,463 + +0.4 588,500 + -0.3 588,500 + +1.7 588,501 - -3.4 588,501 - -4.3 588,501 - +1.3 588,516 + -1.6 588,517 - -0.6 588,517 - +1.7 588,596 + +1.8 588,596 + -0.4 588,599 + +0.4 588,605 + -0.8 588,657 - +0.2 588,680 + +1.1 588,929 - OLJFJH_03180 0.25 +0.5 589,029 + OLJFJH_03180 0.31 +3.0 589,096 - OLJFJH_03180 0.35 +1.8 589,100 + OLJFJH_03180 0.35 -2.3 589,100 + OLJFJH_03180 0.35 -1.8 589,101 - OLJFJH_03180 0.35 +1.6 589,186 + OLJFJH_03180 0.41 +0.7 589,186 + OLJFJH_03180 0.41 +1.3 589,315 - OLJFJH_03180 0.49 -1.1
Or see this region's nucleotide sequence