Strain Fitness in Erwinia amylovora T8 around OLJFJH_02990
Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 |
---|---|---|---|---|---|
remove | |||||
540,134 | + | OLJFJH_02985 | 0.15 | +0.5 | |
540,275 | + | OLJFJH_02985 | 0.28 | -0.2 | |
540,354 | - | OLJFJH_02985 | 0.36 | +0.7 | |
540,392 | + | OLJFJH_02985 | 0.39 | -2.1 | |
540,512 | - | OLJFJH_02985 | 0.51 | +0.3 | |
540,612 | - | OLJFJH_02985 | 0.60 | -0.7 | |
541,278 | - | OLJFJH_02990 | 0.26 | +1.6 | |
541,638 | + | OLJFJH_02990 | 0.88 | +0.3 | |
541,692 | + | -0.8 | |||
541,997 | + | -1.7 | |||
542,386 | - | -1.5 | |||
542,636 | - | -0.8 | |||
542,695 | + | -3.6 | |||
542,696 | - | -1.4 | |||
542,698 | + | +0.5 |
Or see this region's nucleotide sequence