Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02510 and OLJFJH_02515 are separated by 14 nucleotides OLJFJH_02515 and OLJFJH_02520 overlap by 4 nucleotides OLJFJH_02520 and OLJFJH_02525 overlap by 4 nucleotides
OLJFJH_02510: OLJFJH_02510 - DNA mismatch repair endonuclease MutL, at 451,388 to 453,229
_02510
OLJFJH_02515: OLJFJH_02515 - N-acetylmuramoyl-L-alanine amidase AmiB, at 453,244 to 454,902
_02515
OLJFJH_02520: OLJFJH_02520 - tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE, at 454,899 to 455,375
_02520
OLJFJH_02525: OLJFJH_02525 - bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase, at 455,372 to 456,892
_02525
Position (kb) 453
454
455 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 452.269 kb on + strand, within OLJFJH_02510 at 452.362 kb on - strand, within OLJFJH_02510 at 452.370 kb on + strand, within OLJFJH_02510 at 452.371 kb on - strand, within OLJFJH_02510 at 452.406 kb on + strand, within OLJFJH_02510 at 452.463 kb on + strand, within OLJFJH_02510 at 452.463 kb on + strand, within OLJFJH_02510 at 452.464 kb on - strand, within OLJFJH_02510 at 452.469 kb on + strand, within OLJFJH_02510 at 452.537 kb on - strand, within OLJFJH_02510 at 452.775 kb on + strand, within OLJFJH_02510 at 452.916 kb on - strand, within OLJFJH_02510 at 452.996 kb on - strand, within OLJFJH_02510 at 453.234 kb on + strand at 453.241 kb on - strand at 453.386 kb on - strand at 453.457 kb on + strand, within OLJFJH_02515 at 453.513 kb on - strand, within OLJFJH_02515 at 453.578 kb on + strand, within OLJFJH_02515 at 453.686 kb on + strand, within OLJFJH_02515 at 453.687 kb on - strand, within OLJFJH_02515 at 455.564 kb on + strand, within OLJFJH_02525 at 455.744 kb on + strand, within OLJFJH_02525 at 455.744 kb on + strand, within OLJFJH_02525 at 455.745 kb on - strand, within OLJFJH_02525 at 455.864 kb on + strand, within OLJFJH_02525 at 455.864 kb on + strand, within OLJFJH_02525 at 455.865 kb on - strand, within OLJFJH_02525 at 455.885 kb on - strand, within OLJFJH_02525
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 452,269 + OLJFJH_02510 0.48 -0.6 452,362 - OLJFJH_02510 0.53 +0.6 452,370 + OLJFJH_02510 0.53 -1.1 452,371 - OLJFJH_02510 0.53 -1.0 452,406 + OLJFJH_02510 0.55 -0.5 452,463 + OLJFJH_02510 0.58 +0.0 452,463 + OLJFJH_02510 0.58 +1.7 452,464 - OLJFJH_02510 0.58 +0.7 452,469 + OLJFJH_02510 0.59 +0.4 452,537 - OLJFJH_02510 0.62 +3.1 452,775 + OLJFJH_02510 0.75 -0.7 452,916 - OLJFJH_02510 0.83 -1.6 452,996 - OLJFJH_02510 0.87 +1.2 453,234 + +0.8 453,241 - +0.2 453,386 - +1.8 453,457 + OLJFJH_02515 0.13 +0.7 453,513 - OLJFJH_02515 0.16 +0.4 453,578 + OLJFJH_02515 0.20 +0.9 453,686 + OLJFJH_02515 0.27 +2.7 453,687 - OLJFJH_02515 0.27 -0.6 455,564 + OLJFJH_02525 0.13 -0.3 455,744 + OLJFJH_02525 0.24 -0.3 455,744 + OLJFJH_02525 0.24 -2.0 455,745 - OLJFJH_02525 0.25 +0.6 455,864 + OLJFJH_02525 0.32 +1.5 455,864 + OLJFJH_02525 0.32 -0.9 455,865 - OLJFJH_02525 0.32 -0.5 455,885 - OLJFJH_02525 0.34 +0.2
Or see this region's nucleotide sequence