Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02475 and OLJFJH_02480 are separated by 82 nucleotides OLJFJH_02480 and OLJFJH_02485 are separated by 136 nucleotides
OLJFJH_02475: OLJFJH_02475 - adenylosuccinate synthase, at 444,444 to 445,781
_02475
OLJFJH_02480: OLJFJH_02480 - DUF2065 domain-containing protein, at 445,864 to 446,004
_02480
OLJFJH_02485: OLJFJH_02485 - protease modulator HflC, at 446,141 to 447,145
_02485
Position (kb) 445
446
447 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 445.777 kb on - strand at 445.830 kb on - strand at 445.833 kb on + strand at 445.885 kb on + strand, within OLJFJH_02480 at 445.893 kb on - strand, within OLJFJH_02480 at 446.023 kb on + strand at 446.058 kb on + strand at 446.059 kb on - strand at 446.066 kb on + strand at 446.238 kb on + strand at 446.265 kb on + strand, within OLJFJH_02485 at 446.265 kb on + strand, within OLJFJH_02485 at 446.382 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.467 kb on + strand, within OLJFJH_02485 at 446.468 kb on - strand, within OLJFJH_02485 at 446.468 kb on - strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.475 kb on + strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.476 kb on - strand, within OLJFJH_02485 at 446.519 kb on - strand, within OLJFJH_02485 at 446.519 kb on - strand, within OLJFJH_02485 at 446.693 kb on + strand, within OLJFJH_02485 at 446.694 kb on - strand, within OLJFJH_02485 at 446.694 kb on - strand, within OLJFJH_02485 at 446.702 kb on - strand, within OLJFJH_02485 at 446.782 kb on + strand, within OLJFJH_02485 at 446.835 kb on + strand, within OLJFJH_02485 at 446.836 kb on - strand, within OLJFJH_02485 at 446.871 kb on + strand, within OLJFJH_02485 at 446.871 kb on + strand, within OLJFJH_02485 at 446.872 kb on - strand, within OLJFJH_02485 at 446.880 kb on - strand, within OLJFJH_02485 at 447.003 kb on + strand, within OLJFJH_02485 at 447.003 kb on + strand, within OLJFJH_02485
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 445,777 - +0.4 445,830 - +0.5 445,833 + -3.0 445,885 + OLJFJH_02480 0.15 +0.3 445,893 - OLJFJH_02480 0.21 +1.6 446,023 + -1.1 446,058 + -2.2 446,059 - +2.1 446,066 + +1.3 446,238 + +0.1 446,265 + OLJFJH_02485 0.12 +0.4 446,265 + OLJFJH_02485 0.12 +1.2 446,382 + OLJFJH_02485 0.24 -0.2 446,467 + OLJFJH_02485 0.32 +0.8 446,467 + OLJFJH_02485 0.32 -2.1 446,467 + OLJFJH_02485 0.32 +0.3 446,467 + OLJFJH_02485 0.32 +0.5 446,468 - OLJFJH_02485 0.33 -1.6 446,468 - OLJFJH_02485 0.33 +2.6 446,475 + OLJFJH_02485 0.33 -0.9 446,475 + OLJFJH_02485 0.33 +1.1 446,475 + OLJFJH_02485 0.33 +2.9 446,475 + OLJFJH_02485 0.33 +1.0 446,475 + OLJFJH_02485 0.33 -3.2 446,475 + OLJFJH_02485 0.33 +3.0 446,475 + OLJFJH_02485 0.33 -1.1 446,475 + OLJFJH_02485 0.33 +1.0 446,475 + OLJFJH_02485 0.33 -0.8 446,476 - OLJFJH_02485 0.33 -0.3 446,476 - OLJFJH_02485 0.33 -0.6 446,476 - OLJFJH_02485 0.33 -1.0 446,476 - OLJFJH_02485 0.33 -1.4 446,476 - OLJFJH_02485 0.33 -0.7 446,476 - OLJFJH_02485 0.33 +0.2 446,519 - OLJFJH_02485 0.38 +1.1 446,519 - OLJFJH_02485 0.38 -1.9 446,693 + OLJFJH_02485 0.55 -1.0 446,694 - OLJFJH_02485 0.55 -1.0 446,694 - OLJFJH_02485 0.55 -0.0 446,702 - OLJFJH_02485 0.56 -2.9 446,782 + OLJFJH_02485 0.64 +0.3 446,835 + OLJFJH_02485 0.69 -0.2 446,836 - OLJFJH_02485 0.69 +1.6 446,871 + OLJFJH_02485 0.73 +0.9 446,871 + OLJFJH_02485 0.73 -2.7 446,872 - OLJFJH_02485 0.73 +1.7 446,880 - OLJFJH_02485 0.74 -1.4 447,003 + OLJFJH_02485 0.86 +0.8 447,003 + OLJFJH_02485 0.86 +0.6
Or see this region's nucleotide sequence