Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_02265 and OLJFJH_02270 are separated by 249 nucleotides
OLJFJH_02265: OLJFJH_02265 - pirin family protein, at 399,459 to 400,163
_02265
OLJFJH_02270: OLJFJH_02270 - Conserved uncharacterized protein, at 400,413 to 400,652
_02270
Position (kb) 400
401 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2 at 399.419 kb on + strand at 399.420 kb on - strand at 399.447 kb on - strand at 399.455 kb on - strand at 399.524 kb on + strand at 399.524 kb on + strand at 399.578 kb on - strand, within OLJFJH_02265 at 399.578 kb on - strand, within OLJFJH_02265 at 399.584 kb on - strand, within OLJFJH_02265 at 399.633 kb on + strand, within OLJFJH_02265 at 399.638 kb on + strand, within OLJFJH_02265 at 399.702 kb on + strand, within OLJFJH_02265 at 399.702 kb on + strand, within OLJFJH_02265 at 399.702 kb on + strand, within OLJFJH_02265 at 399.703 kb on - strand, within OLJFJH_02265 at 399.770 kb on + strand, within OLJFJH_02265 at 399.770 kb on + strand, within OLJFJH_02265 at 399.770 kb on + strand, within OLJFJH_02265 at 399.770 kb on + strand, within OLJFJH_02265 at 399.771 kb on - strand, within OLJFJH_02265 at 399.862 kb on + strand, within OLJFJH_02265 at 399.879 kb on + strand, within OLJFJH_02265 at 399.880 kb on - strand, within OLJFJH_02265 at 399.880 kb on - strand, within OLJFJH_02265 at 399.976 kb on - strand, within OLJFJH_02265 at 400.051 kb on + strand, within OLJFJH_02265 at 400.221 kb on + strand at 400.235 kb on + strand at 400.247 kb on + strand at 400.255 kb on - strand at 400.339 kb on - strand at 400.356 kb on + strand at 400.371 kb on - strand at 400.430 kb on + strand at 400.430 kb on + strand at 400.430 kb on + strand at 400.431 kb on - strand at 400.574 kb on + strand, within OLJFJH_02270 at 400.577 kb on + strand, within OLJFJH_02270 at 400.578 kb on - strand, within OLJFJH_02270 at 400.686 kb on - strand at 400.689 kb on + strand at 400.690 kb on - strand at 401.512 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 399,419 + +1.3 399,420 - -0.8 399,447 - -2.1 399,455 - -0.4 399,524 + -0.2 399,524 + +0.6 399,578 - OLJFJH_02265 0.17 -0.2 399,578 - OLJFJH_02265 0.17 +1.0 399,584 - OLJFJH_02265 0.18 +0.4 399,633 + OLJFJH_02265 0.25 +1.2 399,638 + OLJFJH_02265 0.25 -0.9 399,702 + OLJFJH_02265 0.34 +1.1 399,702 + OLJFJH_02265 0.34 +1.2 399,702 + OLJFJH_02265 0.34 -0.4 399,703 - OLJFJH_02265 0.35 -0.1 399,770 + OLJFJH_02265 0.44 +2.6 399,770 + OLJFJH_02265 0.44 -0.1 399,770 + OLJFJH_02265 0.44 -0.5 399,770 + OLJFJH_02265 0.44 -0.1 399,771 - OLJFJH_02265 0.44 -0.8 399,862 + OLJFJH_02265 0.57 +0.5 399,879 + OLJFJH_02265 0.60 +0.1 399,880 - OLJFJH_02265 0.60 +0.8 399,880 - OLJFJH_02265 0.60 -3.8 399,976 - OLJFJH_02265 0.73 +0.4 400,051 + OLJFJH_02265 0.84 -1.6 400,221 + -0.1 400,235 + +0.0 400,247 + +1.1 400,255 - +1.2 400,339 - -0.2 400,356 + -4.0 400,371 - +0.4 400,430 + +1.8 400,430 + +0.3 400,430 + +0.1 400,431 - -3.4 400,574 + OLJFJH_02270 0.67 +0.3 400,577 + OLJFJH_02270 0.68 -3.8 400,578 - OLJFJH_02270 0.69 +2.4 400,686 - +0.3 400,689 + +0.4 400,690 - -0.2 401,512 + -1.2
Or see this region's nucleotide sequence