Experiment: Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OLJFJH_01320 and OLJFJH_01325 overlap by 17 nucleotides OLJFJH_01325 and OLJFJH_01330 overlap by 21 nucleotides OLJFJH_01330 and OLJFJH_01335 are separated by 170 nucleotides
OLJFJH_01320: OLJFJH_01320 - thiamine/thiamine pyrophosphate ABC transporter permease ThiP, at 201,791 to 203,401
_01320
OLJFJH_01325: OLJFJH_01325 - thiamine ABC transporter ATP-binding protein ThiQ, at 203,385 to 204,098
_01325
OLJFJH_01330: OLJFJH_01330 - Inner membrane protein yabI, at 204,078 to 204,839
_01330
OLJFJH_01335: OLJFJH_01335 - DNA polymerase II, at 205,010 to 207,373
_01335
Position (kb) 203
204
205 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4 at 202.402 kb on + strand, within OLJFJH_01320 at 202.536 kb on + strand, within OLJFJH_01320 at 203.155 kb on - strand, within OLJFJH_01320 at 203.155 kb on - strand, within OLJFJH_01320 at 203.155 kb on - strand, within OLJFJH_01320 at 203.270 kb on + strand at 203.295 kb on - strand at 203.340 kb on + strand at 203.389 kb on + strand at 203.389 kb on + strand at 203.390 kb on - strand at 203.399 kb on + strand at 203.399 kb on + strand at 203.400 kb on - strand at 203.409 kb on + strand at 203.409 kb on + strand at 203.409 kb on + strand at 203.409 kb on + strand at 203.410 kb on - strand at 203.410 kb on - strand at 203.438 kb on + strand at 203.953 kb on + strand, within OLJFJH_01325 at 203.953 kb on + strand, within OLJFJH_01325 at 203.954 kb on - strand, within OLJFJH_01325 at 204.308 kb on + strand, within OLJFJH_01330 at 204.309 kb on - strand, within OLJFJH_01330 at 204.408 kb on - strand, within OLJFJH_01330 at 204.408 kb on - strand, within OLJFJH_01330 at 204.410 kb on + strand, within OLJFJH_01330 at 204.410 kb on + strand, within OLJFJH_01330 at 204.616 kb on + strand, within OLJFJH_01330 at 204.617 kb on - strand, within OLJFJH_01330 at 204.813 kb on - strand at 204.813 kb on - strand at 204.816 kb on + strand at 204.817 kb on - strand at 204.840 kb on - strand at 204.951 kb on - strand at 204.983 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Matrix:pear;Phage:cocktail;Temp:28;Samp:14-8 remove 202,402 + OLJFJH_01320 0.38 +0.1 202,536 + OLJFJH_01320 0.46 +0.2 203,155 - OLJFJH_01320 0.85 -0.8 203,155 - OLJFJH_01320 0.85 -2.1 203,155 - OLJFJH_01320 0.85 -1.0 203,270 + -0.2 203,295 - +0.1 203,340 + +1.2 203,389 + -1.7 203,389 + +0.3 203,390 - -2.1 203,399 + +0.2 203,399 + -3.0 203,400 - -1.2 203,409 + +0.3 203,409 + +0.2 203,409 + -4.0 203,409 + +0.0 203,410 - +1.1 203,410 - +1.2 203,438 + -1.6 203,953 + OLJFJH_01325 0.80 +4.0 203,953 + OLJFJH_01325 0.80 +0.7 203,954 - OLJFJH_01325 0.80 +0.3 204,308 + OLJFJH_01330 0.30 -1.3 204,309 - OLJFJH_01330 0.30 -2.1 204,408 - OLJFJH_01330 0.43 +0.1 204,408 - OLJFJH_01330 0.43 +0.1 204,410 + OLJFJH_01330 0.44 +0.6 204,410 + OLJFJH_01330 0.44 -1.1 204,616 + OLJFJH_01330 0.71 -0.1 204,617 - OLJFJH_01330 0.71 -0.9 204,813 - +1.1 204,813 - +0.8 204,816 + -0.8 204,817 - +1.5 204,840 - -2.2 204,951 - -1.4 204,983 + -0.1
Or see this region's nucleotide sequence