Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24565

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
4,682,544	+		LU632_RS24565	0.30	-1.3
4,682,657	+				-0.3
4,682,657	+				-0.5
4,682,658	-				-0.1
4,682,677	+				+1.5
4,682,678	-				-0.0
4,682,678	-				-0.6
4,682,678	-				+0.3
4,682,678	-				+0.0
4,682,689	-				-0.3
4,682,745	+				-1.3
4,682,746	-				-0.7
4,682,760	+				-1.7
4,682,873	-				+0.3
4,682,918	-		LU632_RS24570	0.12	+0.5
4,682,992	+		LU632_RS24570	0.18	+0.5
4,682,992	+		LU632_RS24570	0.18	-0.9
4,683,155	+		LU632_RS24570	0.31	-0.7
4,683,629	-		LU632_RS24570	0.69	-2.1
4,683,632	+		LU632_RS24570	0.69	-0.9
4,683,633	-		LU632_RS24570	0.69	+1.3