Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20295

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
3,859,884	+		LU632_RS20285	0.38	-0.2
3,860,046	-		LU632_RS20285	0.78	+0.0
3,860,173	+				-0.0
3,860,286	+				+0.1
3,860,406	+		LU632_RS20290	0.32	+0.2
3,860,407	-		LU632_RS20290	0.32	-1.2
3,860,922	+		LU632_RS20295	0.11	-2.3
3,861,039	+		LU632_RS20295	0.27	-1.3
3,861,545	-				-0.0
3,861,829	+				+0.4
3,861,830	-				-0.1
3,861,830	-				-0.1
3,861,831	+				-0.4
3,861,831	+				-0.6
3,861,832	-				+0.2
3,861,832	-				+1.7
3,861,832	-				+0.5
3,861,832	-				-1.0
3,861,833	+				-1.8
3,861,833	+				-0.3
3,861,834	-				+0.1
3,861,835	+				+0.7
3,861,835	+				+3.2
3,861,836	-				-0.4
3,861,836	-				-0.1
3,861,836	-				+0.2
3,861,836	-				-1.0
3,861,839	+				-0.2
3,862,029	+		LU632_RS20300	0.17	-1.2
3,862,029	+		LU632_RS20300	0.17	-1.1
3,862,029	+		LU632_RS20300	0.17	+2.8
3,862,242	+		LU632_RS20300	0.25	-1.1
3,862,253	+		LU632_RS20300	0.25	-0.5
3,862,266	-		LU632_RS20300	0.26	-1.6
3,862,266	-		LU632_RS20300	0.26	+0.9
3,862,293	+		LU632_RS20300	0.27	-0.6
3,862,294	-		LU632_RS20300	0.27	-0.1
3,862,336	+		LU632_RS20300	0.28	-0.7
3,862,475	+		LU632_RS20300	0.34	+0.2
3,862,475	+		LU632_RS20300	0.34	-0.3
3,862,476	-		LU632_RS20300	0.34	-1.1
3,862,527	+		LU632_RS20300	0.36	-1.4