Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS19695

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
3,740,426	+	rraA	LU632_RS19685	0.51	-0.6
3,740,427	-	rraA	LU632_RS19685	0.51	+0.7
3,740,447	+	rraA	LU632_RS19685	0.55	+0.6
3,740,455	+	rraA	LU632_RS19685	0.57	-0.0
3,740,496	+	rraA	LU632_RS19685	0.65	+1.6
3,740,503	-	rraA	LU632_RS19685	0.67	-0.9
3,740,612	-	rraA	LU632_RS19685	0.89	-1.0
3,740,619	+				-2.0
3,740,632	-				+2.5
3,740,632	-				+0.2
3,740,663	-				-0.6
3,740,683	-				+0.2
3,741,429	+	zapB	LU632_RS19695	0.35	-1.0
3,741,429	+	zapB	LU632_RS19695	0.35	-0.7
3,741,430	-	zapB	LU632_RS19695	0.35	-1.1
3,741,531	-	zapB	LU632_RS19695	0.78	-1.1
3,741,551	+	zapB	LU632_RS19695	0.86	-1.9
3,741,590	+				+1.2
3,741,591	-				-0.3
3,741,670	+				+2.3
3,741,670	+				+1.2
3,741,670	+				-0.3
3,741,670	+				-0.8
3,741,671	-				+0.2
3,741,671	-				-1.2
3,741,674	+				+0.4
3,741,675	-				-1.1
3,741,769	+				-0.2
3,741,948	-				+0.2
3,741,993	+				+0.4
3,742,084	+				+0.8
3,742,085	-				+1.2
3,742,160	-		LU632_RS19700	0.17	-1.1
3,742,190	+		LU632_RS19700	0.20	+2.6
3,742,190	+		LU632_RS19700	0.20	+3.1
3,742,286	+		LU632_RS19700	0.31	-0.7
3,742,286	+		LU632_RS19700	0.31	-0.4
3,742,286	+		LU632_RS19700	0.31	+0.9
3,742,286	+		LU632_RS19700	0.31	-0.3
3,742,287	-		LU632_RS19700	0.32	+0.1
3,742,287	-		LU632_RS19700	0.32	+0.6
3,742,288	+		LU632_RS19700	0.32	+1.6
3,742,433	+		LU632_RS19700	0.49	-0.4
3,742,456	-		LU632_RS19700	0.51	+0.7