Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18350

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
3,466,954	-				-0.5
3,466,954	-				-0.1
3,466,954	-				-0.3
3,467,320	+	tig	LU632_RS18350	0.19	-0.1
3,467,441	-	tig	LU632_RS18350	0.28	-1.2
3,467,624	-	tig	LU632_RS18350	0.42	-1.9
3,468,069	+	tig	LU632_RS18350	0.76	-1.9
3,468,091	+	tig	LU632_RS18350	0.78	-0.5
3,468,091	+	tig	LU632_RS18350	0.78	-2.2
3,468,092	-	tig	LU632_RS18350	0.78	-1.2
3,468,094	-	tig	LU632_RS18350	0.78	-1.2
3,468,108	+	tig	LU632_RS18350	0.79	-1.1
3,468,108	+	tig	LU632_RS18350	0.79	-2.0
3,468,109	-	tig	LU632_RS18350	0.79	-1.7
3,468,164	-	tig	LU632_RS18350	0.83	-0.8
3,468,299	-				-0.1
3,468,386	-				-1.1
3,468,390	-				+3.1
3,468,550	+				+0.9
3,468,653	+				+0.5
3,468,701	-				+0.9
3,468,701	-				+0.4