Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS16575

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
3,134,461	+		LU632_RS16555	0.22	-0.5
3,134,473	-		LU632_RS16555	0.28	-2.0
3,134,513	+		LU632_RS16555	0.48	-1.5
3,134,735	+		LU632_RS16560	0.30	+2.1
3,134,736	-		LU632_RS16560	0.30	-0.9
3,134,877	+		LU632_RS16560	0.71	-2.5
3,135,090	+		LU632_RS16565	0.68	-0.5
3,135,091	-		LU632_RS16565	0.68	-1.5
3,135,114	-		LU632_RS16565	0.80	-2.5
3,135,283	+		LU632_RS16570	0.45	-0.2
3,135,514	+		LU632_RS16575	0.75	+0.1
3,135,522	+		LU632_RS16575	0.79	-0.9
3,135,522	+		LU632_RS16575	0.79	+0.3
3,135,526	+		LU632_RS16575	0.81	-1.3
3,135,527	-		LU632_RS16575	0.81	-2.8
3,135,546	+				-0.9
3,135,547	-				-0.1
3,135,549	+				+0.6
3,135,553	+				-1.5
3,135,573	+				+1.6
3,135,574	-				+2.3
3,135,574	-				+1.4
3,135,596	+				+1.4
3,135,606	+				-0.2
3,135,651	-				-0.3
3,135,737	+				-0.5
3,135,738	-				+2.8
3,135,738	-				+0.0
3,135,777	-				+1.1
3,135,865	+				+2.0
3,135,879	+				-1.5
3,135,879	+				-2.2
3,135,893	+				-0.8
3,135,896	-				-0.4
3,135,896	-				+1.2
3,135,907	-				-0.4
3,135,938	-				-0.1
3,135,956	-				+0.9
3,135,959	-				+1.0
3,135,959	-				-1.9
3,135,983	+				-1.1
3,135,985	+				-0.1
3,136,023	+				+1.2
3,136,028	-				+3.4
3,136,048	-				-1.1
3,136,048	-				-1.8
3,136,051	+				+0.1
3,136,139	+				+3.4
3,136,141	+				-1.5
3,136,141	+				+1.1
3,136,198	+				+2.3
3,136,277	-				-0.4
3,136,327	-				-2.1