Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS11830

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
2,244,675	-				-0.4
2,244,703	+				+3.7
2,244,704	-				+0.3
2,244,704	-				+0.7
2,244,722	-				-1.7
2,244,724	+				-3.1
2,244,724	+				-0.8
2,244,725	-				-0.6
2,244,725	-				-2.6
2,244,756	-		LU632_RS11815	0.14	+0.2
2,244,759	+		LU632_RS11815	0.15	-1.4
2,244,893	+		LU632_RS11815	0.40	-0.8
2,244,894	-		LU632_RS11815	0.41	-1.6
2,244,966	+		LU632_RS11815	0.54	-1.2
2,245,160	+				+0.6
2,245,161	-				+1.2
2,245,161	-				-0.7
2,245,161	-				+3.4
2,245,236	+		LU632_RS11820	0.13	+2.4
2,245,236	+		LU632_RS11820	0.13	+2.3
2,245,238	+		LU632_RS11820	0.14	-1.0
2,245,339	+		LU632_RS11820	0.55	-0.4
2,245,340	-		LU632_RS11820	0.55	-0.7
2,245,415	+		LU632_RS11820	0.85	-0.6
2,245,472	-				-0.0
2,245,472	-				-2.3
2,245,606	+		LU632_RS11825	0.60	+0.8
2,245,662	-				-0.3
2,245,724	+		LU632_RS11830	0.13	-1.8
2,245,725	-		LU632_RS11830	0.14	-1.6
2,246,115	+				+0.3
2,246,115	+				-0.9
2,246,115	+				-0.6
2,246,116	-				+3.8
2,246,116	-				+0.2
2,246,369	+				-1.4
2,246,511	+		LU632_RS11840	0.28	-0.2
2,246,637	-		LU632_RS11840	0.56	-0.4
2,246,656	+		LU632_RS11840	0.60	+0.7
2,246,692	-		LU632_RS11840	0.68	-0.4
2,246,735	+		LU632_RS11840	0.77	+1.9
2,246,736	-		LU632_RS11840	0.77	+1.3
2,246,768	+		LU632_RS11840	0.84	-2.0
2,246,829	+				+2.3
2,246,853	+				+0.8
2,246,854	-				+0.4
2,246,884	+				-1.6
2,246,916	-				-0.9
2,246,917	+				-1.2
2,246,918	-				-1.5