Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS10600

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
2,024,807	+				-0.1
2,024,807	+				-0.5
2,024,872	+		LU632_RS10595	0.47	-1.1
2,024,893	+		LU632_RS10595	0.63	-0.6
2,024,937	-				+0.2
2,025,063	+				-0.7
2,025,176	+		LU632_RS10600	0.48	+1.0
2,025,176	+		LU632_RS10600	0.48	+1.1
2,025,177	-		LU632_RS10600	0.49	+0.0
2,025,177	-		LU632_RS10600	0.49	+1.9
2,025,256	+		LU632_RS10600	0.84	-2.3
2,025,335	+				-0.2
2,025,336	-				-0.8
2,025,420	+				-0.2
2,025,461	+				-0.5
2,025,461	+				+0.3
2,025,462	-				-0.5
2,025,462	-				-2.2
2,025,462	-				-3.0
2,025,473	-				-0.3
2,025,550	+				+2.5
2,025,582	+				+0.4
2,025,582	+				-1.6
2,025,582	+				-1.1
2,025,582	+				-2.6
2,025,618	-				-0.3
2,025,618	-				-2.8
2,025,625	+				-1.3
2,025,625	+				+1.0
2,025,679	+				-1.6
2,025,704	-		LU632_RS10605	0.12	+0.1
2,025,704	-		LU632_RS10605	0.12	-2.5
2,025,754	+		LU632_RS10605	0.26	+1.7
2,025,755	-		LU632_RS10605	0.26	-0.7
2,025,761	-		LU632_RS10605	0.28	-1.5
2,025,764	-		LU632_RS10605	0.28	+1.8
2,025,764	-		LU632_RS10605	0.28	+1.2
2,026,014	-				-1.0
2,026,070	+				-0.3
2,026,208	-		LU632_RS10610	0.44	-0.1
2,026,228	+		LU632_RS10610	0.50	+2.1
2,026,228	+		LU632_RS10610	0.50	+0.8
2,026,228	+		LU632_RS10610	0.50	+2.3
2,026,228	+		LU632_RS10610	0.50	+0.4
2,026,228	+		LU632_RS10610	0.50	+0.7
2,026,229	-		LU632_RS10610	0.51	+0.4
2,026,229	-		LU632_RS10610	0.51	-0.6
2,026,251	+		LU632_RS10610	0.58	+1.1
2,026,252	-		LU632_RS10610	0.58	-1.8
2,026,252	-		LU632_RS10610	0.58	-0.2