Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS05900

Experiment: Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Main Stem (TE2-S-C9-MS)
1,118,387	+				+1.0
1,118,398	+				+1.5
1,118,402	+				+0.2
1,118,402	+				-0.9
1,118,402	+				+3.0
1,118,402	+				-1.5
1,118,491	+		LU632_RS05895	0.38	-0.2
1,118,492	-		LU632_RS05895	0.39	-0.4
1,118,492	-		LU632_RS05895	0.39	+0.2
1,118,494	-		LU632_RS05895	0.39	-2.3
1,118,754	-		LU632_RS05900	0.23	-1.5
1,118,815	-		LU632_RS05900	0.49	-0.8
1,118,817	+		LU632_RS05900	0.50	-2.1
1,118,844	+		LU632_RS05900	0.61	+0.7
1,118,940	+				-1.4
1,118,941	-				+1.3
1,118,952	+				-1.9
1,118,983	-				+0.5
1,119,075	+				-0.3
1,119,076	-				+1.0
1,119,243	+				-0.7
1,119,244	-				-0.9
1,119,274	-				+2.7
1,119,431	-				-0.7
1,119,445	-				+0.6
1,119,492	+				+0.8
1,119,492	+				-1.5
1,119,511	-				+0.7
1,119,511	-				-1.7
1,119,540	+				-1.2
1,119,567	-				+1.5
1,119,575	-				+1.3
1,119,575	-				+1.5
1,119,651	+				-0.7
1,119,655	+				+1.2
1,119,655	+				-0.9
1,119,673	+				+0.6
1,119,832	+				+0.5
1,119,836	-				-0.9
1,119,932	+				-2.8