Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS24370

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
4,646,798	-				+0.8
4,649,149	+				-1.5
4,649,203	-				-1.1
4,649,363	-	tnpA	LU632_RS24380	0.60	-2.0
4,649,363	-	tnpA	LU632_RS24380	0.60	-2.2
4,649,375	-	tnpA	LU632_RS24380	0.64	-2.2
4,649,430	+	tnpA	LU632_RS24380	0.81	+2.2
4,649,440	+	tnpA	LU632_RS24380	0.85	+1.8
4,649,450	+	tnpA	LU632_RS24380	0.88	-0.5
4,649,451	-	tnpA	LU632_RS24380	0.88	+0.4
4,649,451	-	tnpA	LU632_RS24380	0.88	-0.2
4,649,451	-	tnpA	LU632_RS24380	0.88	-1.5
4,649,453	-	tnpA	LU632_RS24380	0.89	+0.0
4,649,453	-	tnpA	LU632_RS24380	0.89	-1.5
4,649,453	-	tnpA	LU632_RS24380	0.89	+2.0
4,649,455	-	tnpA	LU632_RS24380	0.90	+0.0
4,649,455	-	tnpA	LU632_RS24380	0.90	+0.1
4,649,455	-	tnpA	LU632_RS24380	0.90	-2.1
4,649,683	+				+3.1
4,649,683	+				+0.8
4,649,703	+				+2.4
4,649,703	+				-1.0
4,649,703	+				-1.1
4,649,704	-				+0.2
4,649,704	-				-0.1