Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS22980

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
4,378,497	-				+1.1
4,378,590	+				-0.0
4,378,591	-				+0.8
4,378,626	-				+3.9
4,379,445	+				+0.4
4,379,450	+				-1.4
4,379,451	-				+2.9
4,379,509	-				-0.5
4,379,509	-				-0.5
4,379,509	-				+0.4
4,379,642	-		LU632_RS22980	0.29	-0.8
4,379,796	-		LU632_RS22980	0.51	-0.2
4,379,836	+		LU632_RS22980	0.57	-1.2
4,379,852	+		LU632_RS22980	0.59	-2.7
4,380,128	-				+0.8
4,380,152	+				+0.0
4,380,152	+				-0.8
4,380,758	+				-0.7
4,380,759	-				-1.2
4,380,789	-				-2.2
4,380,813	+				-0.8
4,380,907	+				+0.8
4,380,933	+				+0.0
4,381,005	-	malQ	LU632_RS22990	0.14	+0.8
4,381,005	-	malQ	LU632_RS22990	0.14	+0.8
4,381,027	+	malQ	LU632_RS22990	0.15	+0.0