Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21675

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
4,145,624	-	opgB	LU632_RS21670	0.57	+1.5
4,145,648	-	opgB	LU632_RS21670	0.58	+1.9
4,145,670	+	opgB	LU632_RS21670	0.59	+1.0
4,145,671	-	opgB	LU632_RS21670	0.59	+1.0
4,145,769	+	opgB	LU632_RS21670	0.63	+1.2
4,145,878	+	opgB	LU632_RS21670	0.68	-0.9
4,145,952	-	opgB	LU632_RS21670	0.71	-1.1
4,146,142	+	opgB	LU632_RS21670	0.79	-1.8
4,146,177	+	opgB	LU632_RS21670	0.81	-3.0
4,146,361	+	opgB	LU632_RS21670	0.88	-1.9
4,146,438	+				+0.2
4,146,573	+				+0.9
4,146,612	-				+0.5
4,146,789	-		LU632_RS21675	0.83	+0.5
4,146,955	+				+1.5
4,147,791	-				-0.6
4,147,797	-				-1.6
4,147,819	+				+0.2
4,147,819	+				+1.3