Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS21530

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
4,118,462	+				+0.9
4,118,520	+				-3.2
4,118,520	+				+2.0
4,118,536	+				-0.4
4,118,537	-				+2.3
4,118,539	+				+2.9
4,118,540	-				-1.4
4,118,578	+				+1.0
4,118,578	+				+2.0
4,118,579	-				+2.1
4,118,583	-				-0.3
4,118,720	-				+0.7
4,118,802	+		LU632_RS21530	0.28	-0.9
4,118,882	-		LU632_RS21530	0.52	-0.7
4,118,888	-		LU632_RS21530	0.54	-1.5
4,119,193	+				-0.1
4,119,194	-				+0.7
4,119,195	+				+1.3
4,119,196	-				+0.0
4,119,403	+		LU632_RS21535	0.46	-0.9
4,119,404	-		LU632_RS21535	0.46	+0.9
4,119,554	+				+0.2
4,119,559	+				-0.7
4,119,559	+				-1.2
4,119,559	+				+2.1
4,119,560	-				+0.4
4,119,564	+				-1.2
4,119,568	-				-1.0
4,119,571	+				-0.1
4,119,572	-				-0.2
4,119,572	-				-0.4
4,119,601	-				+0.5
4,119,677	+				-0.4
4,119,677	+				+0.2
4,119,677	+				-1.9
4,119,677	+				-1.9
4,119,677	+				-2.3
4,119,678	-				+1.0
4,119,678	-				+2.1
4,119,678	-				-1.3
4,119,706	-				-1.6