Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS20325

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,865,850	-		LU632_RS20310	0.64	-0.3
3,865,904	-		LU632_RS20310	0.74	+0.2
3,865,912	+		LU632_RS20310	0.76	+0.5
3,865,940	+		LU632_RS20310	0.82	-0.5
3,865,940	+		LU632_RS20310	0.82	+3.5
3,865,965	+		LU632_RS20310	0.87	-0.0
3,866,012	+				+5.5
3,866,127	-		LU632_RS20315	0.36	+0.7
3,866,136	+		LU632_RS20315	0.39	-2.7
3,866,136	+		LU632_RS20315	0.39	-1.1
3,866,137	-		LU632_RS20315	0.39	+0.7
3,866,184	+		LU632_RS20315	0.53	+2.1
3,866,184	+		LU632_RS20315	0.53	+0.5
3,866,185	-		LU632_RS20315	0.54	-1.2
3,866,185	-		LU632_RS20315	0.54	-1.3
3,866,313	-				-3.4
3,866,553	+		LU632_RS20320	0.42	+0.7
3,866,754	-				+1.6
3,866,754	-				+1.0
3,866,768	+		LU632_RS20325	0.11	-0.5
3,866,768	+		LU632_RS20325	0.11	-1.1
3,866,768	+		LU632_RS20325	0.11	-0.7
3,866,780	+		LU632_RS20325	0.17	-3.1
3,866,781	-		LU632_RS20325	0.18	+0.7
3,866,826	+		LU632_RS20325	0.41	-3.5
3,866,829	-		LU632_RS20325	0.43	-0.4
3,866,835	+		LU632_RS20325	0.46	-1.6
3,866,861	+		LU632_RS20325	0.59	-0.9
3,867,063	+				-1.1
3,867,090	+				+1.6
3,867,090	+				+0.7
3,867,090	+				+1.7
3,867,090	+				+0.6
3,867,090	+				-0.4
3,867,202	+		LU632_RS20330	0.20	-0.8
3,867,262	+		LU632_RS20330	0.28	-0.6
3,867,919	+				-2.5
3,867,920	-				-1.0
3,867,926	-				-0.2
3,867,938	-				-0.1