Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18730

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,538,421	-		LU632_RS18725	0.43	+0.5
3,538,421	-		LU632_RS18725	0.43	+2.2
3,539,135	+		LU632_RS18725	0.88	-1.2
3,539,579	+		LU632_RS18730	0.17	+0.6
3,539,579	+		LU632_RS18730	0.17	-0.7
3,539,603	+		LU632_RS18730	0.18	+0.6
3,539,639	-		LU632_RS18730	0.21	-2.7
3,539,758	-		LU632_RS18730	0.28	-0.1
3,540,075	+		LU632_RS18730	0.48	+0.9
3,540,076	-		LU632_RS18730	0.49	-0.3
3,540,076	-		LU632_RS18730	0.49	-3.6
3,540,076	-		LU632_RS18730	0.49	+0.1
3,540,077	+		LU632_RS18730	0.49	+1.9
3,540,077	+		LU632_RS18730	0.49	+0.8
3,540,077	+		LU632_RS18730	0.49	-0.2
3,540,078	-		LU632_RS18730	0.49	-1.0
3,540,107	+		LU632_RS18730	0.51	-1.2
3,540,107	+		LU632_RS18730	0.51	+1.1
3,540,107	+		LU632_RS18730	0.51	+1.2
3,540,107	+		LU632_RS18730	0.51	-1.4
3,540,107	+		LU632_RS18730	0.51	-0.6
3,540,107	+		LU632_RS18730	0.51	-1.0
3,540,107	+		LU632_RS18730	0.51	-0.8
3,540,108	-		LU632_RS18730	0.51	-3.4
3,540,108	-		LU632_RS18730	0.51	-0.8
3,540,108	-		LU632_RS18730	0.51	-0.4
3,540,108	-		LU632_RS18730	0.51	-3.3
3,540,108	-		LU632_RS18730	0.51	-0.5
3,540,110	+		LU632_RS18730	0.51	-1.7
3,540,110	+		LU632_RS18730	0.51	+1.0
3,540,111	-		LU632_RS18730	0.51	+0.4
3,540,343	-		LU632_RS18730	0.66	+0.4
3,540,346	-		LU632_RS18730	0.66	+2.8