Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18470

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,490,672	+				-2.3
3,490,702	-				-1.0
3,490,858	-				+2.0
3,490,858	-				-0.0
3,490,858	-				-1.5
3,490,908	+		LU632_RS18470	0.14	-2.8
3,490,935	+		LU632_RS18470	0.17	+0.5
3,491,058	-		LU632_RS18470	0.28	+0.1
3,491,190	+		LU632_RS18470	0.39	+2.8
3,491,190	+		LU632_RS18470	0.39	+1.4
3,491,190	+		LU632_RS18470	0.39	-1.8
3,491,190	+		LU632_RS18470	0.39	-2.6
3,491,190	+		LU632_RS18470	0.39	-0.5
3,491,191	-		LU632_RS18470	0.39	+1.1
3,491,343	-		LU632_RS18470	0.53	+1.0
3,491,343	-		LU632_RS18470	0.53	+1.8
3,491,374	+		LU632_RS18470	0.56	+1.6
3,491,602	+		LU632_RS18470	0.76	-2.0
3,491,856	-				+0.2
3,492,072	-		LU632_RS18475	0.22	-0.8
3,492,144	-		LU632_RS18475	0.34	+0.6
3,492,298	-		LU632_RS18475	0.60	-1.4