Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS18015

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,404,127	-				+0.5
3,404,164	-				+0.5
3,404,168	-				+0.5
3,404,478	+				+0.2
3,404,528	+				+0.7
3,404,529	-				-1.3
3,404,546	+				-0.8
3,404,702	-				+1.5
3,404,783	+				+2.0
3,404,783	+				-1.5
3,404,784	-				-1.5
3,404,867	-				+4.7
3,405,112	-		LU632_RS18015	0.11	+1.5
3,405,112	-		LU632_RS18015	0.11	-1.6
3,405,204	+		LU632_RS18015	0.34	-0.6
3,405,205	-		LU632_RS18015	0.34	+0.2
3,405,281	+		LU632_RS18015	0.53	-1.2
3,405,452	-				-0.4
3,405,456	+				+1.5
3,405,507	-				+1.6
3,405,507	-				-3.1
3,405,537	-				-2.3
3,405,656	+				-2.8
3,405,906	-		LU632_RS18020	0.32	+0.9