Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17775

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,346,219	+		LU632_RS17770	0.74	-1.0
3,346,225	+		LU632_RS17770	0.74	-0.5
3,346,225	+		LU632_RS17770	0.74	-0.5
3,346,225	+		LU632_RS17770	0.74	+0.9
3,346,226	-		LU632_RS17770	0.74	+3.9
3,346,226	-		LU632_RS17770	0.74	-1.8
3,346,227	+		LU632_RS17770	0.74	-2.8
3,346,228	-		LU632_RS17770	0.74	-0.6
3,346,228	-		LU632_RS17770	0.74	-0.1
3,346,283	-		LU632_RS17770	0.77	-1.5
3,346,320	+		LU632_RS17770	0.78	-2.2
3,346,321	-		LU632_RS17770	0.78	-0.2
3,346,328	+		LU632_RS17770	0.78	-1.1
3,346,328	+		LU632_RS17770	0.78	-0.4
3,346,494	+		LU632_RS17770	0.85	-0.5
3,346,494	+		LU632_RS17770	0.85	+0.2
3,346,495	-		LU632_RS17770	0.85	-0.2
3,346,507	-		LU632_RS17770	0.86	-0.3
3,346,690	-				+0.5
3,347,459	+				-0.2
3,347,459	+				-0.3
3,347,461	+				+0.2
3,347,461	+				+0.9
3,347,462	-				-2.1
3,347,462	-				-3.7
3,347,462	-				-2.6
3,347,539	+				-0.6
3,347,561	+				-0.7
3,347,611	-				-1.5
3,347,624	-				+2.8
3,347,633	+				-0.1