Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17745

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,336,017	+		LU632_RS17735	0.58	-0.1
3,336,026	+		LU632_RS17735	0.58	+3.2
3,336,077	-		LU632_RS17735	0.62	-2.1
3,336,110	-		LU632_RS17735	0.65	+1.8
3,336,217	+		LU632_RS17735	0.73	+1.3
3,336,217	+		LU632_RS17735	0.73	+1.0
3,336,218	-		LU632_RS17735	0.73	+2.5
3,336,255	+		LU632_RS17735	0.76	-0.1
3,336,256	-		LU632_RS17735	0.76	-0.4
3,336,297	-		LU632_RS17735	0.79	+1.1
3,336,329	-		LU632_RS17735	0.81	+1.2
3,336,340	-		LU632_RS17735	0.82	-3.0
3,336,340	-		LU632_RS17735	0.82	-1.5
3,336,429	+		LU632_RS17735	0.89	-2.2
3,336,429	+		LU632_RS17735	0.89	-0.0
3,336,429	+		LU632_RS17735	0.89	-0.2
3,336,430	-		LU632_RS17735	0.89	+0.5
3,336,430	-		LU632_RS17735	0.89	+1.4
3,336,430	-		LU632_RS17735	0.89	-0.5
3,336,543	-				-0.3
3,336,555	+				+1.3
3,336,556	-				-1.8
3,336,556	-				-1.8
3,336,659	+		LU632_RS17740	0.24	-0.6
3,336,659	+		LU632_RS17740	0.24	+1.6
3,336,742	-		LU632_RS17740	0.62	-0.9
3,336,832	-				-2.4
3,336,832	-				-0.8
3,336,898	+				-0.3
3,336,904	+				+2.2
3,336,908	+				+1.2
3,336,908	+				-1.9
3,336,909	-				-1.8
3,336,909	-				-2.6
3,336,933	-				-1.0
3,336,933	-				+4.3
3,336,935	-				+1.2
3,336,935	-				+0.5
3,337,016	+				+0.3
3,337,052	-				-2.5
3,337,052	-				+3.0
3,337,125	+		LU632_RS17745	0.11	-1.0
3,337,125	+		LU632_RS17745	0.11	-2.5
3,337,125	+		LU632_RS17745	0.11	-0.4
3,337,194	-		LU632_RS17745	0.18	-1.5
3,337,243	-		LU632_RS17745	0.23	-0.2
3,337,572	+		LU632_RS17745	0.55	-2.3