Strain Fitness in Erwinia tracheiphila SCR3 around LU632_RS17615

Experiment: Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Experiment:TE2, Cucumber 9 Petiole 1 (TE2-S-C9-P1)
3,309,060	+	yejK	LU632_RS17610	0.17	-2.1
3,309,061	-	yejK	LU632_RS17610	0.17	-0.3
3,309,206	+	yejK	LU632_RS17610	0.32	+1.5
3,309,206	+	yejK	LU632_RS17610	0.32	+0.5
3,309,207	-	yejK	LU632_RS17610	0.32	-0.9
3,309,212	+	yejK	LU632_RS17610	0.32	-2.8
3,309,213	-	yejK	LU632_RS17610	0.32	-1.7
3,309,213	-	yejK	LU632_RS17610	0.32	-0.9
3,309,473	+	yejK	LU632_RS17610	0.58	-0.8
3,309,509	+	yejK	LU632_RS17610	0.62	+0.9
3,309,509	+	yejK	LU632_RS17610	0.62	-2.8
3,309,509	+	yejK	LU632_RS17610	0.62	+1.5
3,309,509	+	yejK	LU632_RS17610	0.62	-0.5
3,309,509	+	yejK	LU632_RS17610	0.62	-0.3
3,309,510	+	yejK	LU632_RS17610	0.62	+1.1
3,309,510	-	yejK	LU632_RS17610	0.62	-1.5
3,309,510	-	yejK	LU632_RS17610	0.62	+0.1
3,309,510	-	yejK	LU632_RS17610	0.62	+1.2
3,309,725	-	yejK	LU632_RS17610	0.83	-1.1
3,309,750	+	yejK	LU632_RS17610	0.86	-2.0
3,309,777	+	yejK	LU632_RS17610	0.89	-1.8
3,309,778	-	yejK	LU632_RS17610	0.89	+1.3
3,309,851	-				+0.5
3,309,891	+				-0.6
3,309,892	-				+1.3
3,309,894	+				+1.7
3,309,895	-				-0.5
3,309,908	+				-0.8
3,309,909	-				-0.2
3,309,909	-				-1.2
3,309,909	-				+0.1
3,309,964	-				-1.8
3,309,974	-				-0.7
3,310,051	+				-1.1
3,310,070	+				+1.1
3,310,168	+		LU632_RS17615	0.51	-1.7
3,310,168	+		LU632_RS17615	0.51	-1.2